Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0474 ATGATATTTCCTCCTCAGCCCCCAACCAAAACCTTCTCCATTAAGAACTCTCTCTCTCTCTCTTCCTATGAACTAATGGCCCAAGTGCAAAGAGGCCAAGAAAACCATCATCAAGGGATCAAGCTCTTTGGAGCAACGATTAAATTGGACGGTGGGGATCCAAAGGAGGGCAAGAAAGAGAGCGAAGATCTGACGGCGGAGAAGAGGCCAGATAAGATCATAGCATGCCCGAGATGCAAGAGCTTGGAGACTAAGTTCTGTTACTTCAACAACTACAACGTTAATCAACCCAGACACTTTTGTAAGGGATGCCAGCGCTACTGGACGGCCGGTGGCGCCCTCCGAAATGTTCCTGTCGGTTCTGGCCGCCGGAGGGGAAAGCCACCGTGCCGCGCAGGCGCTGCTGGATTTGCCGACGGCTGCTTGTATGAAAGTTCCGATGATGATGGACACAAGTTTGGGTTGGAGCAAGGGTTGGTTTTGGATGAGTGGCACGTTGCCGTGCCTCACGGTGGTTTCCGCCAACTTATTCCGGAGAAGCGGCGGAGGACAGCATCAGCTCTGTTTCAAGGTGAATAA 579 0.5199 MIFPPQPPTKTFSIKNSLSLSSYELMAQVQRGQENHHQGIKLFGATIKLDGGDPKEGKKESEDLTAEKRPDKIIACPRCKSLETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGSGRRRGKPPCRAGAAGFADGCLYESSDDDGHKFGLEQGLVLDEWHVAVPHGGFRQLIPEKRRRTASALFQGE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0474 192 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 34 186 - -
Aev04g0474 192 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Aev04g0474 192 PANTHER CYCLIC DOF FACTOR 2 34 186 IPR045174 GO:0003700|GO:0006355
Aev04g0474 192 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
Aev04g0474 192 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0474 Aev-Chr4 2971619 2973475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0474 38 186 C2C2-Dof Transcription Factor Family AT2G34140 54.819 2.64e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g0474 zf-Dof 6.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0474 - - mesc:110604808 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0474 04 2971619 2973475 Aev04g0474 04 2971619 2973475 ECH