Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3322 ATGCCATTTCACAAAATGAGAAACTATGATCTGCAATTTCTTTCACCTCTGATCTCTGCTTTCCTATTACTGTTTTCAAGTGTACCCTTATGCCTAGTTCAAACAAAATCCACAATTGAACCTTGCAGCACCTCAAATTCATGCCCCTCTCTCCTCTCTTATCTATTGCCTTGGGACTCTACGGTGTCTGAAATTGCAACTCGGTTCAATGTGAGTGTTTCTGATATATTGACTGCAAACTCTGTTTTCCCCATAACACCATCATGTTCCCATAGAATCCTCAGAGCAGAATCACTCTTGAAAATACCAATAACATGTCAGTGTGTGGATGGAATAAGGAGGTCTATTTCAACCACTTACACTGTACAAGCAGCTGATACACTTTCATCCATATCACAAGGCTATGGTGGTCTTGTCAGTGCAGAACAGATTGAGAGTGTGAACAGCATTAATGCTACGAACCCTTTGACTGATGGGGGAAGAATTGTGATACCATTGCCATGTACATGTCTGAACAATGTCAACAATGGTGGACCTGCAATATTTATGTCATATGTGGTTCAGAAAGGGGAGAGCTTGGGAAGCATAGCACAAGTTTTTGGTACTACTGTTTCTGATTTGGAATCTGTTAATGGATTAAGCCAAGCTTCAGCTGATCCAGGAGACATATTATCTGTTCCTATTGCAGCATGTTCATCAGCTCCTCTGAATTGGTACAATGAGAGTTTGACAGTCCCAAATGGCTCATATGCTTTAACTGCCACCAACTGCATCAAATGCACTTGTGCACCAATTGATCTCAAGCTGCAATGTGTTCCTTCTGGACTAGATGTCCCATGCTTCAATTTACGTTGCAAAGGGTCCAATCTTACCATTGGTGATAAATCTGTGGAATATTCAAAATCTGCTTGCAATGTCACCCAATGTGTTTATCGTGGCCATAGGGGTGGCAAAATTTTTAGCAGTATGATTTACTCTTCGTACCTGCAGTGTCCGGATAAGAATCAAAGTTATGGGGGAGCATCATGTTGGCCACCCTTATCACCATATCTTGCAGACCCAATTTTTATGCCTCCAAGCCCAAGCCCAAGCCCACTCCCTTTGCCTGTTTCTGAGGCTTCTCCAATGACCCATGCCTATGATAAATGGCTTGGTCAATTTTCATTAATCAATGTGCTGCAGTTGCTCTTGCCAAAACTTATCCTTTACTTTTTAATGTGA 1221 0.4169 MPFHKMRNYDLQFLSPLISAFLLLFSSVPLCLVQTKSTIEPCSTSNSCPSLLSYLLPWDSTVSEIATRFNVSVSDILTANSVFPITPSCSHRILRAESLLKIPITCQCVDGIRRSISTTYTVQAADTLSSISQGYGGLVSAEQIESVNSINATNPLTDGGRIVIPLPCTCLNNVNNGGPAIFMSYVVQKGESLGSIAQVFGTTVSDLESVNGLSQASADPGDILSVPIAACSSAPLNWYNESLTVPNGSYALTATNCIKCTCAPIDLKLQCVPSGLDVPCFNLRCKGSNLTIGDKSVEYSKSACNVTQCVYRGHRGGKIFSSMIYSSYLQCPDKNQSYGGASCWPPLSPYLADPIFMPPSPSPSPLPLPVSEASPMTHAYDKWLGQFSLINVLQLLLPKLILYFLM* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3322 406 Gene3D LysM domain 115 175 IPR036779 -
Aev03g3322 406 SMART LysM_2 53 103 IPR018392 -
Aev03g3322 406 SMART LysM_2 184 227 IPR018392 -
Aev03g3322 406 SMART LysM_2 119 165 IPR018392 -
Aev03g3322 406 SUPERFAMILY LysM domain 183 227 IPR036779 -
Aev03g3322 406 SUPERFAMILY LysM domain 118 166 IPR036779 -
Aev03g3322 406 ProSiteProfiles LysM domain profile. 183 226 IPR018392 -
Aev03g3322 406 CDD LysM 184 226 IPR018392 -
Aev03g3322 406 Pfam LysM domain 120 164 IPR018392 -
Aev03g3322 406 Pfam LysM domain 185 227 IPR018392 -
Aev03g3322 406 Pfam LysM domain 61 103 IPR018392 -
Aev03g3322 406 CDD LysM 118 164 IPR018392 -
Aev03g3322 406 Gene3D LysM domain 179 234 IPR036779 -
Aev03g3322 406 ProSiteProfiles LysM domain profile. 118 164 IPR018392 -
Aev03g3322 406 CDD LysM 61 80 IPR018392 -
Aev03g3322 406 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 21 361 - -
Aev03g3322 406 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 21 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3322 Aev-Chr3 31098177 31100131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3322 17 365 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 42.535 4.24e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3322 - - gmx:100819382 555.829