Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2604 ATGGCTCAAGTACAAAGTGGCCAAGAAAGTGAAGGGATCAAGCTATTTGGGACAACAATCACGTTGCAAGATAGACAAACAAGAGAAGATCATCATCACAAAAAGGGTACTACAAGTAGTGAAGATCATGTGACCTCCGATGATGAGGAGAAGAAGCCTAATAAGATCATACCCTGCCCAAGATGCAAGAGCATGGAAACCAAGTTTTGTTACTTCAATAACTATAACGTTAATCAGCCTAGGCATTTCTGCAAAGGCTGCCAGAGGTACTGGACGGCTGGTGGGGCCCTCCGCAACGTGCCAGTAGGAGCTGGCAGGCGAAAGGCCAAGCCGCCATGCCGTGCCAGCACCGGGGAGTTTTCAGATGGTGGACTCTATGAATCATCTACCACGGTTGAGAAGTTTGGGTTGGATGATGAGGGATTGGTTTTGGGTGATGAGTGGGATGTTGCCACCGTGGTTCACGGTGGTTTCCACCAGATTTTTCCGTCGAAACGGCGGAGGACAAGCGCAAGTGTTCAACCTTGTTAA 531 0.4878 MAQVQSGQESEGIKLFGTTITLQDRQTREDHHHKKGTTSSEDHVTSDDEEKKPNKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPCRASTGEFSDGGLYESSTTVEKFGLDDEGLVLGDEWDVATVVHGGFHQIFPSKRRRTSASVQPC* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2604 176 PANTHER CYCLIC DOF FACTOR 2 5 172 IPR045174 GO:0003700|GO:0006355
Aev03g2604 176 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Aev03g2604 176 MobiDBLite consensus disorder prediction 1 53 - -
Aev03g2604 176 Pfam Dof domain, zinc finger 55 110 IPR003851 GO:0003677|GO:0006355
Aev03g2604 176 MobiDBLite consensus disorder prediction 24 53 - -
Aev03g2604 176 MobiDBLite consensus disorder prediction 1 23 - -
Aev03g2604 176 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 172 - -
Aev03g2604 176 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2604 Aev-Chr3 26598492 26599022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2604 8 176 C2C2-Dof Transcription Factor Family AT1G29160 54.494 3.94e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev03g2604 zf-Dof 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2604 - - aip:107634834 228.794