Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2383 ATGTTAGACAACACCAACAACAATAACACTGCTAATTATTCTTCTGCTGCACCTTCTTCTTCTTCTGATGCCGCCTTTGCATTATCAGAAAATGGGCTTCCTAACAACAAAAGAAAAAGAAGACCCGCTGGAACACCCGATCCAGATGCTGAGGTTGTGTCTCTGTCACCTAAGACGCTGCTGGAATCAGACAGGTATGTGTGCGAGATCTGCAACCAGGGGTTTCAGAGAGACCAGAATCTCCAAATGCACAGGAGGAGGCATAAAGTGCCCTGGAAACTTCTGAAGAGGGAAACACAGGGGATGAAGAAGAAGGTGTTTGTTTGTCCTGAGCCAAGTTGCTTGCACCATGATCCTTGCCATGCCCTTGGTGACCTTGTTGGGATCAAGAAGCACTTCAGAAGGAAGCACAGCAATCACAAGCAGTGGGTCTGTGACAAGTGCTCTAAAGGCTATGCCGTTCAATCTGATTACAAGGCTCACATCAAAACCTGTGGCACCAGAGGCCATTCCTGTGACTGTGGCCGTGTCTTTTCCAGGGTGGAGAGTTTCATAGAACACCAAGATGCCTGCACTGTCCGGCAGCACAGGCCAGAGCTACAAGCACTTCAACAACCTGCATGCTCTTCTAGAACAGCTTCAAGCACAAGTCCATCTAGTGAGGCCAATTTTAGCATAGCCCCATTGCAAGGACTTCCACTCCCAAAACTATCATCTGATCAAACAGCTTCAGCTTCCACCTTGTTACTAACTCCAGATACACACAACAATAATAAGCCTACCACCTCCAATAATAATAATAATAATCAGAGGCATAACTTAGAACTTCAGCTACTTCCCTCATCAATAAATCCTCAGGAAAAAAGAAATCCAAAAGATAACCAAAACTATGAGACCCGGTTGAAACTCTCAATAGGTTCATGCAGTGATGACAAAGGCAGTACAGAATCAGAGAGGCCAAGTTCAGAAACACACACTGCAGAAATTAGGAACAATAATAATAATAATAGTATTGTGGTGAATGATTCAACATCATCAGCATTGGAAGTGGCAAGGTTGAAAGAGTTTGCTGGTGAGGAGCTGAAGTTGGCAATGGCAGAGAAAGCCTATGCAGAAGAGGCAAGAAGAGAAGCCAAACGGCAAATTGAGATAGCTGAGCTTGAGTTTGAGAATGCAAAGAGGATAAGGAAACAAGCACAAGATGAGCTTGGAAAAGCTGAAGCATTGAGGAAACAAGCCATCAAGAAGATGAGTTCAACTGTTATGGAAATAACTTGCCAAAATTGCAAGCAACAGTTTCACTCTACATCCACTGGGGTTATTCCACCAGAAGAGACTTCCATTGTAGTGAGTTATATGTCCTCCGCTAACACAGATGGAGAAGCTGAATAA 1392 0.4411 MLDNTNNNNTANYSSAAPSSSSDAAFALSENGLPNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQGMKKKVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDYKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRQHRPELQALQQPACSSRTASSTSPSSEANFSIAPLQGLPLPKLSSDQTASASTLLLTPDTHNNNKPTTSNNNNNNQRHNLELQLLPSSINPQEKRNPKDNQNYETRLKLSIGSCSDDKGSTESERPSSETHTAEIRNNNNNNSIVVNDSTSSALEVARLKEFAGEELKLAMAEKAYAEEARREAKRQIEIAELEFENAKRIRKQAQDELGKAEALRKQAIKKMSSTVMEITCQNCKQQFHSTSTGVIPPEETSIVVSYMSSANTDGEAE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2383 463 PANTHER OS03G0310200 PROTEIN 8 463 IPR039288 GO:0009630
Aev03g2383 463 Pfam Zinc finger, C2H2 type 66 88 IPR013087 -
Aev03g2383 463 Gene3D Classic Zinc Finger 128 206 - -
Aev03g2383 463 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Aev03g2383 463 Gene3D Classic Zinc Finger 44 110 - -
Aev03g2383 463 MobiDBLite consensus disorder prediction 1 55 - -
Aev03g2383 463 MobiDBLite consensus disorder prediction 303 336 - -
Aev03g2383 463 PANTHER ZINC FINGER PROTEIN SHOOT GRAVITROPISM 5 8 463 - -
Aev03g2383 463 MobiDBLite consensus disorder prediction 250 270 - -
Aev03g2383 463 SMART c2h2final6 143 170 IPR013087 -
Aev03g2383 463 SMART c2h2final6 66 88 IPR013087 -
Aev03g2383 463 SMART c2h2final6 107 137 IPR013087 -
Aev03g2383 463 SUPERFAMILY beta-beta-alpha zinc fingers 65 163 IPR036236 -
Aev03g2383 463 Coils Coil 361 416 - -
Aev03g2383 463 MobiDBLite consensus disorder prediction 202 224 - -
Aev03g2383 463 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Aev03g2383 463 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2383 Aev-Chr3 25208201 25210722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2383 30 463 C2H2 Transcription Factor Family AT2G01940 52.967 1.62e-146 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g2383 zf-C2H2 0.0044 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2383 03 25208201 25210722 Aev03g2383 03 25208201 25210722 ECH