Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2337 ATGGGTCTGGGTCTGGGCAAATCAGTCCTTTGGCTAACGAAACTGGTGGTAGCAGCCTCCCTCATCCTAGCCTCTTCCCTGCAGGGGGCTGAGCCAGAGGCCAAGTTCAAGTGCTCCACCACCAACGCCACGTGTCAGGCCCTAATCGACTACTCGAGCCAAAACGCGACGACCCTGCACGCCATCCAAAGCCTGTTCAACGTGAAGCACCTGCTCGACATCCTCGGCGCCAATAACCTCCCAGCCAACACTCTGGGCAGTCACGGCGTTCCCCCCAAGCGGGTCGTCAAGGTTCCGTTCCCCTGCAGGTGCCGTAACGGCACGGGGCTCTCGGACGGCGTGCCAATGTACAGGATCAAACCGGGTGATGGGCTGGACGCGATCGCACGGACGGTGTTCGGGGGAGTAGTGACGTACCCGCAGATCCAGGTTGCAAATAAGATTGCTGATGCGAACAAGATCAAGGCTGGGGATTCGGTGTACATACCCTTGCCTTGTAGCTGTGATTCGGTGGGAGGGAGCAGTGTGGTCCACTATGCCCACATCGTGCTCCCGGGGAATACCGTGGAAGGTATTGCAGAGCAGTTTGGTACCACGCAGAAGGTGCTTCTTGATCTTAATGGGATTACTAACCCAAAGAATCTTCTGGCCGGTCAAGTTCTCGATGTCCCCCTCAAAGCTTGTACGTCGAACGTGAGTAAAGAGTCATTGGACTATCCTCTGCTTGTTCCAAATTCCACTTACGTTGTGACTGCTAACGAATGCGTGAAATGCAACTGCGACTCCAGTAAAAACTACATATTGCAATGCGAGCCATCAAATATAAAACCAACAGGCAAGTGGTCGGTTTGCCCCTCACTGAAATGCCAAGGGAACCTCTCCCTTGGCAACTTCACTTCTGCTGCTACCGATGCTTGCGATCGCTCTTTCTGCGCCTACACCGGTTATGACTCCCGCAACATCTCCACAGCTCTAGCAACTGACTCATCTTGTCCTGCACCAGCTCCAGCACCCAATGGTGGTGGTGGTAGTTCAGTATCACCAAGTGGTGGTGGTTCAGGAGCATCAAGGGGGAGCACCTACAGTCTGTTCATTGTCATCAACCTCATCCTCCTTTCTGTCTATCTTTTGTAG 1134 0.5397 MGLGLGKSVLWLTKLVVAASLILASSLQGAEPEAKFKCSTTNATCQALIDYSSQNATTLHAIQSLFNVKHLLDILGANNLPANTLGSHGVPPKRVVKVPFPCRCRNGTGLSDGVPMYRIKPGDGLDAIARTVFGGVVTYPQIQVANKIADANKIKAGDSVYIPLPCSCDSVGGSSVVHYAHIVLPGNTVEGIAEQFGTTQKVLLDLNGITNPKNLLAGQVLDVPLKACTSNVSKESLDYPLLVPNSTYVVTANECVKCNCDSSKNYILQCEPSNIKPTGKWSVCPSLKCQGNLSLGNFTSAATDACDRSFCAYTGYDSRNISTALATDSSCPAPAPAPNGGGGSSVSPSGGGSGASRGSTYSLFIVINLILLSVYLL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2337 377 SMART LysM_2 116 163 IPR018392 -
Aev03g2337 377 SMART LysM_2 180 224 IPR018392 -
Aev03g2337 377 Gene3D LysM domain 115 171 IPR036779 -
Aev03g2337 377 CDD LysM 117 162 IPR018392 -
Aev03g2337 377 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 16 332 - -
Aev03g2337 377 SUPERFAMILY LysM domain 179 224 IPR036779 -
Aev03g2337 377 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 16 332 - -
Aev03g2337 377 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Aev03g2337 377 CDD LysM 181 223 IPR018392 -
Aev03g2337 377 Gene3D LysM domain 175 235 IPR036779 -
Aev03g2337 377 Pfam LysM domain 117 163 IPR018392 -
Aev03g2337 377 Pfam LysM domain 181 224 IPR018392 -
Aev03g2337 377 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2337 Aev-Chr3 24911677 24913960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2337 5 335 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 47.447 1.82e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2337 - - gmx:100804190 405.216