Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0760 ATGAGAAGGCCTTGTTGTTGTGAGAATAAGGAAGGTGGAACCAACAAAGGTGCTTGGTCTAAGCAAGAAGACCAAAAACTTATTGACTATGTCCGTCTTCATGGTGAAGGCTGTTGGCGCTCCATCCCCAAAGCTGCAGGGCTGCATCGTTGTGGGAAAAGCTGTAGACTGAGATGGATAAATTATCTACGACCAGACATAAAGCGAGGTAACTTTGCCGAAGATGAAGAAGATCTCATCATCAAACTCCATGCCCTCCTTGGCAACCGGTGGTCATTGATAGCTGGAAGGTTACCGGGACGCACAGACAATGAAGTGAAGAACCATTGGAACTCTCACATCCGAAGAAAGCTAGTAAAGATGGGAGTTGACCCTAACAACCACAAGAACCTTCTTCATCATAATCATAATCAGACTAGTTCTCCTCTTGCTGAAGAAGAAGAAGTAGTTAATGCTTCTTCTTCTTCTTCATCCGAATTGAATCTTGACCTAACCATTGCTTTCCCTTCTTCTTCTTCTTCATCAACACCTACACTACTACTCGCTCAAGACAAGGCAGCTTCTTCTTACCCAAAAGACATGGAACAAGATCAATCTTCTCCTGCACTACTACTCTTTCAATGA 624 0.4359 MRRPCCCENKEGGTNKGAWSKQEDQKLIDYVRLHGEGCWRSIPKAAGLHRCGKSCRLRWINYLRPDIKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNHWNSHIRRKLVKMGVDPNNHKNLLHHNHNQTSSPLAEEEEVVNASSSSSSELNLDLTIAFPSSSSSSTPTLLLAQDKAASSYPKDMEQDQSSPALLLFQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0760 207 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Aev03g0760 207 PANTHER MYB TRANSCRIPTION FACTOR 138 207 - -
Aev03g0760 207 PANTHER MYB TRANSCRIPTION FACTOR 2 139 - -
Aev03g0760 207 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Aev03g0760 207 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Aev03g0760 207 Gene3D - 71 148 - -
Aev03g0760 207 MobiDBLite consensus disorder prediction 192 207 - -
Aev03g0760 207 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Aev03g0760 207 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Aev03g0760 207 Gene3D - 16 68 - -
Aev03g0760 207 MobiDBLite consensus disorder prediction 132 154 - -
Aev03g0760 207 CDD SANT 71 114 IPR001005 -
Aev03g0760 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 139 - -
Aev03g0760 207 MobiDBLite consensus disorder prediction 185 207 - -
Aev03g0760 207 CDD SANT 18 63 IPR001005 -
Aev03g0760 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 63 IPR017930 -
Aev03g0760 207 SMART sant 68 116 IPR001005 -
Aev03g0760 207 SMART sant 15 65 IPR001005 -
Aev03g0760 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Aev03g0760 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 138 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0760 Aev-Chr3 5879110 5881336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0760 2 172 MYB Transcription Factor Family AT4G38620 58.857 2.30e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g0760 Myb_DNA-binding 1.9e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0760 03 5879110 5881336 Aev03g0760 03 5879110 5881336 ECH