Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0669 ATGGAGCTTTCTCAACTTGGTTTCCTAGAGGAGCTTCTAGCTCCAAGAAAAGACACATGGAGTGCTCTATCCACCACTGCCTTCAGTGATATGCTCTTCCCTGCTTCTTCTTCTTCTTCTTGTTGGAACTTTGACCCTTTTGTTGATAACCCTTCTCTTGCCTCTTCAAGCCCTTCATCTTCCTTTGTTGCTGCATTCTCAACAACAGCAACAACAGACCAAAGATTTGAGTGCCCCTTCACGACACCTGAACCAGCATCATACCCTTTTGCTGCTTCTGATGATGGCTTCACAATGCCTGACCTTGACTCTTCATATCCACTCACACAGCAAAATGAAGACCATCTTCATCATAACCCTTCTTCATTGGAGGATAATAACAATGAAGATGGTGTCTTTTTGGGAAGTGATGACAAGTTGGGTCTGTTGTTGGAAGAGAGAACGATTGGATGCTGCAAAGTTGAGGAGCAAGGTATGGTGGATGTGGATGTTCCTGTGGTTTTCAACATGGGCCCGTGTGGTGCTGAGAAAAAGCCCAAGCCCAAGAAGATTGAAGGGCAACCTTCAAAGAATCTCATGGCAGAGAGGAGGAGAAGGAAGCGCCTCAATGACCGTCTCTCCATGCTAAGGTCAATAGTCCCCAAGATCAGCAAGATGGACAGAACCTCCATCTTAGGAGATACCATAGATTACATGAAAGAGCTGCTTGAAAGGATTAGCAAGTTGCAGGAGGAAGAAGAAGAAGTGGAGGATGGCAGAAATCATATCAATCTCTTGGGCATTTCTAAAGAGCTCAAGCCAAATGAAGTTATGGTTAGAAATTCCCCAAAGTTTGATGTTGAGAGGAGAGACCAAGACACCAGAATCAGTATCTGTTGTGCTACAAAGCCAGGATTGTTGCTGTCAACTGTGAACACGTTGGAAGCATTAGGCCTTGAGATTCAGCAATGTGTTATAAGCAGTTTCAATGATTTCTCAATGCAAGCATCTTGCTCAGAGGTAGCTGAACAGAGAAATTGTATTAACCCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGGTATGGTGGGAGATGTCTCTAG 1086 0.442 MELSQLGFLEELLAPRKDTWSALSTTAFSDMLFPASSSSSCWNFDPFVDNPSLASSSPSSSFVAAFSTTATTDQRFECPFTTPEPASYPFAASDDGFTMPDLDSSYPLTQQNEDHLHHNPSSLEDNNNEDGVFLGSDDKLGLLLEERTIGCCKVEEQGMVDVDVPVVFNMGPCGAEKKPKPKKIEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEEEEVEDGRNHINLLGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVAEQRNCINPEEIKQALFRNAGYGGRCL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0669 361 SMART finulus 192 241 IPR011598 GO:0046983
Aev03g0669 361 Coils Coil 232 252 - -
Aev03g0669 361 PANTHER - 2 361 - -
Aev03g0669 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 252 IPR036638 GO:0046983
Aev03g0669 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Aev03g0669 361 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 361 - -
Aev03g0669 361 Gene3D - 180 251 IPR036638 GO:0046983
Aev03g0669 361 CDD ACT_UUR-ACR-like 287 328 - -
Aev03g0669 361 MobiDBLite consensus disorder prediction 101 129 - -
Aev03g0669 361 Pfam Helix-loop-helix DNA-binding domain 192 235 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0669 Aev-Chr3 4932596 4934063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0669 177 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 69.355 8.50e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g0669 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0669 - - gmx:100806571 432.565