Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0649 ATGCCTGCAACAACAAAGGATCATAGTAATGAGAACCAAAACAATTCCTCCGATAATGGAAGTAAAAGCACCACAGCAGCAACAAAGGCAGCAGCAGAACAAGGGCTAAAGTGTCCAAGGTGTGATTCACCAAACACAAAATTCTGTTACTACAACAACTACAGCCTAACACAGCCAAGGCATTTCTGCAAGACTTGCAGAAGGTACTGGACGAAAGGTGGAGCCTTGAGGAATGTCCCAATTGGTGGTGGTTGCAGGAAGAACAAGAAGGGGATGAAGCCACCATCATCATCATCTTCATCTTCATCAAGGGCACTCTCATATGGTGATTCCAGAGACTCTGGTGGTTCTTCCGATATTCTTCAACTCGGTGGACTCACCAAGTTGCTCAATGGCCTTTCAAATAATCCCTTGGATTTCAACCTTGGAGGCTTAACTACTTTCCCTGCTTCTTCTTCTTCTAGGCTTCAACAATTTCAACTTCCAATTGCAACTGGTTTCTATGATTACAGTAATAATAATAATAGTCATAACAATCAGTTCTGTTCTTTTGGGGATGGTTCTGCAGCATCTTCTTCTTCTGGTGGGTTCCAACTTGAGCCTTGTTCTGTTGTTGGTGGATCAAGTAGTTCTAATCTGATTGGTCTGAACTTCCCCTCTGCTTTTCCATCTGCTTCTTCTTCTTCTTCTTCTTCAAGTGGAATGTTTGGTAGTGCACTCCAACAAGGATTGAACTCATTGAATTTTCATACTAGTACTCTTGCTTCTTCAATTGAGTCATTGAGCTCATTGAACCAGGACTTGCACTGGAAGCTGCAGCAGCAGAGGCTAGGAATGCTCTATGGTGGAGACAATAATCAGAATCAGAAAGAAAACAACAACATTAACAACAATGTTTTGTTTTCAGCAGTCAATAATAATACTAATAACAATAATAATAATGTTATTAGTACTCTTGAGAACCAGGGAGTGGTTGTGCAGAGGCCACAACCAATTCTGTTTCAGAGCCTTGAGATTTCAAAGGCAGTACCTTCATCATCAGAGATTGATACTAGTACTAGTACTACTACAGCACCAACAGAATGGTTCTTTGGGAATAATAATTCTTATGGATCAGCGGTGGCTCCTACTCCTATTACTCCTACTCCAACTAGTACCAGCAGTGGTGGCAATAATGGAGGAAGAAGCAACAACTGGGTTGGTGTTGGTGGTGTCCATGCTTGGGGTGATGTGCAGCAACCATACACTGCTTTGCCCTAG 1260 0.4214 MPATTKDHSNENQNNSSDNGSKSTTAATKAAAEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKGMKPPSSSSSSSSRALSYGDSRDSGGSSDILQLGGLTKLLNGLSNNPLDFNLGGLTTFPASSSSRLQQFQLPIATGFYDYSNNNNSHNNQFCSFGDGSAASSSSGGFQLEPCSVVGGSSSSNLIGLNFPSAFPSASSSSSSSSGMFGSALQQGLNSLNFHTSTLASSIESLSSLNQDLHWKLQQQRLGMLYGGDNNQNQKENNNINNNVLFSAVNNNTNNNNNNVISTLENQGVVVQRPQPILFQSLEISKAVPSSSEIDTSTSTTTAPTEWFFGNNNSYGSAVAPTPITPTPTSTSSGGNNGGRSNNWVGVGGVHAWGDVQQPYTALP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0649 419 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Aev03g0649 419 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 16 91 - -
Aev03g0649 419 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 232 419 - -
Aev03g0649 419 MobiDBLite consensus disorder prediction 81 116 - -
Aev03g0649 419 MobiDBLite consensus disorder prediction 374 397 - -
Aev03g0649 419 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Aev03g0649 419 MobiDBLite consensus disorder prediction 1 28 - -
Aev03g0649 419 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Aev03g0649 419 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 232 419 IPR045174 GO:0003700|GO:0006355
Aev03g0649 419 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 91 IPR045174 GO:0003700|GO:0006355
Aev03g0649 419 MobiDBLite consensus disorder prediction 92 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0649 Aev-Chr3 4794820 4796079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0649 21 97 C2C2-Dof Transcription Factor Family AT5G65590 74.026 4.72e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev03g0649 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0649 - - ahf:112791714 281.952