Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0412 ATGTCTGAAGTTAAAGACCCGGCGATAAAGCTGTTTGGGAGGACGATTTCGCTGCCACTGATTCGCAATGACTCTTCTTCAGCAGCACCTGCACCTCCTCCTTCATCTCCCTCTTCACCTCGTGAAGTTGAAGTGAGCTCTGCATCACAAACAGAGGCAGAGGAACTATCAAGGAAAGAAGTTACCTCAGCACAAGACAAGGAAGCCTCACATCAAACCACAGAGGATTTAAAATCTCCCACAGCATCTTCAGACATATTTGAGAATCCTAAGACTCCCTCAGCTGAAAGAGAGAGTTCATTACTGAAATCATCAACAAATGGAGAACAGAGTGAGACCAGTGTTTCTCAGGAAAAAGCTCCAAAGAAACCAGACAAAATACTTCCTTGCCCGCGATGCAATAGCATGGACACCAAATTCTGTTATTACAACAACTACAATGTCAATCAGCCCCGCCACTTCTGCAAGAACTGTCAGAGATACTGGACTGCTGGAGGAACAATGAGGAATGTCCCCGTAGGCGCCGGCCGCCGCAAGAACAAAAACTCTGCCGCCTCGCACTATCGCCACATAATGGTCCCGGAGGCGCTTCAAGCGGCCGCAGCAGCTAACCTCAGTGGCCCCAATGGACTCCACAATGCTGTTTTGGGAAATGGAGCAGCTGTCTTAACCTTTGGCCCTGATTCTCCCCTCTGTGATTCCATGTCTTCTGTACTGAACATTGCTGACAAAGCAGCACCAAATGGATTATTCCATGCACCTGAGGCGAGTACTTTTGTTTCCTATAGTAGGGAGGATGATGGGAATGATCACTCAATTGGAGTTTCTGCCACAACTTCAACTTCAAATTCAAATTCAAATTCAAATTCATCACAGGACAAAAGAGTTGAAGGTTTCCCTCCTCCTCAGATGACATACTTGCAGAGTTCACCTTGGCCTTATCCATGGAATTCTGCAGTTCCTCCTCCGCCGCCTCCTGCATTCTGCCCACCAGGCTATCATCATCCCATGCCATTCTACACAGCACCTTCATATTGGGGTTGTATGGGACCCTCATGGAATATGAATGTTCCTTGCATCTCACACCAATCTTCTGTTAACCATTCTGTTTCTGCAGCAGGCACTACTAGTTCTGGCCCCAATTCACCTCTGGGGAAACACTCAAGGGATGGTAACATCATCACACAGACCAACTCGCAGAAAGAAAAGGCTGAACATAACAGTAACAATAATTCAGAGAGCAATGATAATGTGTTGATCCCCAAGACACTTAGAATTGACGACCCTAGTGAAGCTGCAAGGAGTTCCATATGGTCAACACTAGGGATCAGGAATGACAAGGCCAATTCTCTCAATGGAGGAGGCCTTTTCAAGGCATTTCCATTATCCAAGGGGAATGATAAGAATCACATGGTGGTGGAAGCGTCCCCGGTGCTGCACGCCAACCCCGCCGCTCTGTCGCGGTCTCTCACCTTCCATGAGAGGACCTAG 1491 0.4762 MSEVKDPAIKLFGRTISLPLIRNDSSSAAPAPPPSSPSSPREVEVSSASQTEAEELSRKEVTSAQDKEASHQTTEDLKSPTASSDIFENPKTPSAERESSLLKSSTNGEQSETSVSQEKAPKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAASHYRHIMVPEALQAAAAANLSGPNGLHNAVLGNGAAVLTFGPDSPLCDSMSSVLNIADKAAPNGLFHAPEASTFVSYSREDDGNDHSIGVSATTSTSNSNSNSNSSQDKRVEGFPPPQMTYLQSSPWPYPWNSAVPPPPPPAFCPPGYHHPMPFYTAPSYWGCMGPSWNMNVPCISHQSSVNHSVSAAGTTSSGPNSPLGKHSRDGNIITQTNSQKEKAEHNSNNNSESNDNVLIPKTLRIDDPSEAARSSIWSTLGIRNDKANSLNGGGLFKAFPLSKGNDKNHMVVEASPVLHANPAALSRSLTFHERT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0412 496 MobiDBLite consensus disorder prediction 272 296 - -
Aev03g0412 496 MobiDBLite consensus disorder prediction 75 115 - -
Aev03g0412 496 MobiDBLite consensus disorder prediction 370 423 - -
Aev03g0412 496 Pfam Dof domain, zinc finger 125 182 IPR003851 GO:0003677|GO:0006355
Aev03g0412 496 ProSitePatterns Zinc finger Dof-type signature. 130 166 IPR003851 GO:0003677|GO:0006355
Aev03g0412 496 ProSiteProfiles Zinc finger Dof-type profile. 128 182 IPR003851 GO:0003677|GO:0006355
Aev03g0412 496 MobiDBLite consensus disorder prediction 370 419 - -
Aev03g0412 496 MobiDBLite consensus disorder prediction 16 129 - -
Aev03g0412 496 MobiDBLite consensus disorder prediction 53 74 - -
Aev03g0412 496 MobiDBLite consensus disorder prediction 262 304 - -
Aev03g0412 496 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 496 - -
Aev03g0412 496 PANTHER CYCLIC DOF FACTOR 2 1 496 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0412 Aev-Chr3 2985869 2988638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0412 4 494 C2C2-Dof Transcription Factor Family AT5G39660 38.654 4.77e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev03g0412 zf-Dof 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0412 - - gmx:100813315 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0412 03 2985869 2988638 Aev03g0412 03 2985869 2988638 ECH
Aev03g0412 03 2985869 2988638 Aev01g2131 01 25691102 25693563 ECH
Aev03g0412 03 2985869 2988638 Aev01g2131 01 25691102 25693563 PCT