Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0376 ATGATGGAGGAGAGGAAGTTTGTTTGCAAGTACTGCAGCAAGAGGTTTCCTTGTGGTAAGTCTCTTGGTGGACACATCAGGACCCACATGACTGAAGAAAGGAACAATGCTGAAAACAACAACAACAACAACAACAGTGATGATCATAATCATCTCAAGTTGTTGGATTCTGGAAGGAAGAGGAAGAGGGAGAGGGATTCATCATGGCCTGAACCTGGTGGTGGTGGTGCTGCTGCTAACATCAACAACCCCATTTATGGACTGAGAGAGAACCCCAAGAAGACCACAAGGTTTGTGCATATTGATGCCACTTTGGCACAGGAAGATGAGAGGTTCTGCAAAGAATGTGGGAAAGGATTCCCTTCATTGAAGGCTCTTTGTGGCCACATGGCTTGTCACTCTGAGAAAGAGAAGGGACTCAACAACAACAACACTGAGGATCAGAAATTGGTTATGGATAGTCAATCTGATACTGAGAGCTCTGGTGCTCCAACACATCCTAGGAGATCCAAGAGGATGAGGTTCAAGACAGTTAACCTCAGCAATCAACCCTCTGCTCCTCTGCCAAATGGTTCTTCTTCTGTCTCTGAGGTGGAGCAGGAGCAGGAAGAGGTGGCTAGGATGTTGATTATGCTGTCCAGAGATTACAGCCATAAGGTTCGTTTTGCTTCTGTTGCAGAGTCCTCTGATAACAATTCGGTTGTTCTGGAGACAGCAAAGTCATCTTCTCCTGATGAAACAAGGGTTGCTGCTAAGGGCCTTGTGTCCTCTAATGCTTATGGTGTTGTTCTGCAGAAGAAGCAGGCCAATGACATCAAGTTCAAGTGTGCTGATAATTCTGCTTCTGCTCATGTCAGATATGGTCTCAAGACCAAATTGGTGGAATCTGATGTTCCAAATTCTGATGAATTCAATAATAGTAAGGGGTGGAATGTGAGAGATAAGTCTGGCTTTGGAGACTACGATGATGACGGCGAATCGAGGAAGGTGCTGAGCAAAGGCAGGAGCAAATACACTGAAGCTGCAGCTAATAAGGATTTGGATTATGAAAGAACAAATGGAACTGCAAGGAAATTTGAGTTCAGGAAGAGGGCTAGTAACTATGACTCTCTTGGAGGTCACAATTCAGCTAATGGTTCTACCAAGAAGACAGCAAATGGTTTTACTAATGATGAAATCTATGAGAATGGAAGAAAACCATGGAAGTATGAGAGCTTGGCAAGTGAATATGATGGCTCTTATGATTCAACAGAGGAAGAGAGCGACGAAAACAGCACCGATACTGATTCGTTTCCGGCTGCAAAGTCTCGCAAAAATAAGGCCACTAATGGGAAGAAGAGCAGCAAGGCAAAGAAGAAGTTGAAGTCAAAGAAAAGCAGAGAACATGAGTGTCCAATCTGCTACAGAATTTTCAGGTCAGGCCAAGCCTTAGGAGGCCACAAGAGATCACATTTTATTGGAGGCTCTGAGGAGAACACTCTTGTGATCAAACAAGGTGCTCCTGCTGTTCCTTGCCTCATTGATCTCAATCTACCTGCTCCTATTGATGACTAA 1554 0.444 MMEERKFVCKYCSKRFPCGKSLGGHIRTHMTEERNNAENNNNNNNSDDHNHLKLLDSGRKRKRERDSSWPEPGGGGAAANINNPIYGLRENPKKTTRFVHIDATLAQEDERFCKECGKGFPSLKALCGHMACHSEKEKGLNNNNTEDQKLVMDSQSDTESSGAPTHPRRSKRMRFKTVNLSNQPSAPLPNGSSSVSEVEQEQEEVARMLIMLSRDYSHKVRFASVAESSDNNSVVLETAKSSSPDETRVAAKGLVSSNAYGVVLQKKQANDIKFKCADNSASAHVRYGLKTKLVESDVPNSDEFNNSKGWNVRDKSGFGDYDDDGESRKVLSKGRSKYTEAAANKDLDYERTNGTARKFEFRKRASNYDSLGGHNSANGSTKKTANGFTNDEIYENGRKPWKYESLASEYDGSYDSTEEESDENSTDTDSFPAAKSRKNKATNGKKSSKAKKKLKSKKSREHECPICYRIFRSGQALGGHKRSHFIGGSEENTLVIKQGAPAVPCLIDLNLPAPIDD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0376 517 MobiDBLite consensus disorder prediction 315 337 - -
Aev03g0376 517 MobiDBLite consensus disorder prediction 410 458 - -
Aev03g0376 517 MobiDBLite consensus disorder prediction 439 458 - -
Aev03g0376 517 ProSitePatterns Zinc finger C2H2 type domain signature. 464 484 IPR013087 -
Aev03g0376 517 MobiDBLite consensus disorder prediction 176 195 - -
Aev03g0376 517 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Aev03g0376 517 MobiDBLite consensus disorder prediction 58 88 - -
Aev03g0376 517 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 517 - -
Aev03g0376 517 SMART c2h2final6 462 484 IPR013087 -
Aev03g0376 517 SMART c2h2final6 7 29 IPR013087 -
Aev03g0376 517 SMART c2h2final6 111 133 IPR013087 -
Aev03g0376 517 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Aev03g0376 517 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 517 - -
Aev03g0376 517 MobiDBLite consensus disorder prediction 151 195 - -
Aev03g0376 517 MobiDBLite consensus disorder prediction 367 393 - -
Aev03g0376 517 Gene3D Classic Zinc Finger 1 68 - -
Aev03g0376 517 Gene3D Classic Zinc Finger 95 169 - -
Aev03g0376 517 ProSiteProfiles Zinc finger C2H2 type domain profile. 462 484 IPR013087 -
Aev03g0376 517 Pfam C2H2-type zinc finger 462 484 - -
Aev03g0376 517 Pfam C2H2-type zinc finger 7 31 - -
Aev03g0376 517 Pfam C2H2-type zinc finger 113 135 - -
Aev03g0376 517 MobiDBLite consensus disorder prediction 369 391 - -
Aev03g0376 517 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Aev03g0376 517 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Aev03g0376 517 SUPERFAMILY beta-beta-alpha zinc fingers 5 133 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0376 Aev-Chr3 2775708 2777261 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g0376 zf-C2H2_6 6.5e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0376 03 2775708 2777261 Aev03g0376 03 2775708 2777261 ECH