Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0112 ATGTTGAGCAATAACTGTGACGATGAAATGCTTGTCATCCCTCCAACGAATAACGAATGGACACAGACGACTATGATAGATGATCATCAACATCATAACCACAAGGGTTCATCTTCATCTTCATCAATGATGGGTCCGAGTACTGGTGGTGGAAGGGGGGTTATGGAGAAAGCAGGATCAGGAGGGCAAGAAGTAGTAGTGATCCAGCAGCAAGAGCAAGCACTCAAGTGCCCAAGATGCGACTCATCAAACACAAAGTTCTGCTACTACAACAACTACAGCCTGTCGCAGCCTAGGCACTTCTGCAAAGCCTGCAAGCGTTACTGGACAAGGGGTGGAACTCTCCGCAATGTTCCTGTTGGAGGCGGCTGCAGAAAAAACAGCAAGCGTCTCAAGCGCCACTCCTCCTCTTCTTCCTCCACCACCACCACCGCCACTGCTTCTCCTCCTTCTTCTTCCACTCCCAATTCCAATAATAACAATATTACTGCTGCTTCAACCTCAAATCACATCAACCCTACTACTTTGTTTTATGGCCTACCTACTGCTAGTAGTAGAAACTCCTGTGAGGCTGCCATGAATAATCTTCCTTTCCCAGGGTTCAGTAGTAGTGGTACAAGATCAGGAGGAGTTTCGAGTAGTAACAATAATAATTCTGGTTATGATCTTCAGCTTCATCATCTGAATGCAGCCCTTGGTGGCGGTGGCGGGTTAGGTCTTTTTTCATCTGGGATTATGTCAAGTGAAGCTAGTGACACTACTGATAATGGAGGGTTTGGAACATCATGTAACAGCTCATTTCTCTCTGCTTACAATTCCATCTTTGGTGGTTCTTCGAATAATTCTACAGCTACCACTCCAGTTATGGCTTCACTTCTGAGCTCTACTCTGCTGCAGCAAAAACTCATCAATAATGGTGGCAGCAACAACAGCACTAGTTTCCAGCAGGGCTTGGCTCCTTTGGAGGAAAGTGCACTAGTGATGGCTTCAAAAGAAGTGAGAGGGGAAGGAGGGCAGTGGAATCACCAGATCGATCATCATCACCATCACCATCACCATGTGACCATGTCTGATCCTTCTCTTTATTGGAACACGGCTTCTGCAACAGCAGCAGCTTTGGGCGGTGCTTGGACTGATAATCAAACTAATATTGGTCCTTCAGTCACTTCTCTCATCTAG 1179 0.464 MLSNNCDDEMLVIPPTNNEWTQTTMIDDHQHHNHKGSSSSSSMMGPSTGGGRGVMEKAGSGGQEVVVIQQQEQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNSKRLKRHSSSSSSTTTTATASPPSSSTPNSNNNNITAASTSNHINPTTLFYGLPTASSRNSCEAAMNNLPFPGFSSSGTRSGGVSSSNNNNSGYDLQLHHLNAALGGGGGLGLFSSGIMSSEASDTTDNGGFGTSCNSSFLSAYNSIFGGSSNNSTATTPVMASLLSSTLLQQKLINNGGSNNSTSFQQGLAPLEESALVMASKEVRGEGGQWNHQIDHHHHHHHHVTMSDPSLYWNTASATAAALGGAWTDNQTNIGPSVTSLI* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0112 392 Pfam Dof domain, zinc finger 73 129 IPR003851 GO:0003677|GO:0006355
Aev03g0112 392 MobiDBLite consensus disorder prediction 134 167 - -
Aev03g0112 392 MobiDBLite consensus disorder prediction 29 58 - -
Aev03g0112 392 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Aev03g0112 392 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 5 372 - -
Aev03g0112 392 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
Aev03g0112 392 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 372 IPR045174 GO:0003700|GO:0006355
Aev03g0112 392 MobiDBLite consensus disorder prediction 119 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0112 Aev-Chr3 1016307 1017684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0112 75 392 C2C2-Dof Transcription Factor Family AT1G28310 40.785 2.96e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev03g0112 zf-Dof 5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0112 - - ccaj:109814566 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0112 03 1016307 1017684 Aev03g0112 03 1016307 1017684 ECH