Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0065 ATGAGGAAAAACCAGCAACAACAGATGAATCATAATCAGCAAGCAGCAGAGGCTCTCAAGTGCCCGAGATGTGACTCAACAAACACAAAGTTTTGTTATTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGTAAGAGGCACTGGACTAAAGGTGGAACTCTTCGCAATGTCCCTGTTGGTGGTGGCAGGAAGAACAAAAGGGTAGTCAAGAAATCATCAACCACCACCTCTGCTCCCCACATAGCAACAATTCAACCACCACCTCTTGCTGTGGCTGATGATCAGAAACACATGAATTCATCTCTGTATCAAGGTCTAACTAGGCCTCCACCATTTCTGCTACAACAGAATAGTCTGATGATGAGTAACAGAGGAATAGAAAGCAAGGATTTTGGTGTTGGTGTTGGTAATAATAATGGAATCTTTCTGGGTTCATCTTTTCCTCCTCCTCCTCCTCAGAGTCAAAGCTCAATCTTCCCCTTCTCAAGCTCTTCTTTTGACACAAACACGTGTTCAGTTTCAACCTCTTTGCAATCCTCCAATGTTTATAATAACTGTGGGGAAGAGTTCAGAACAATGGAGGAGACAACAATCAGCAGCATGATGCCAATTAGCACTAACACACAGCCATGGGAGATGCTACCGACAGCATCAGCAACAACAAGTGTTGGCATGCAAATGTCAAACTATTGGAGTTGGGAGGACCTTGATTCTTTGGTCTCAACTGATCTAAACAACAATCCTTGGGATGATCATATCAAACCTTGA 783 0.4355 MRKNQQQQMNHNQQAAEALKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVVKKSSTTTSAPHIATIQPPPLAVADDQKHMNSSLYQGLTRPPPFLLQQNSLMMSNRGIESKDFGVGVGNNNGIFLGSSFPPPPPQSQSSIFPFSSSSFDTNTCSVSTSLQSSNVYNNCGEEFRTMEETTISSMMPISTNTQPWEMLPTASATTSVGMQMSNYWSWEDLDSLVSTDLNNNPWDDHIKP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0065 260 Pfam Dof domain, zinc finger 18 71 IPR003851 GO:0003677|GO:0006355
Aev03g0065 260 ProSitePatterns Zinc finger Dof-type signature. 21 57 IPR003851 GO:0003677|GO:0006355
Aev03g0065 260 ProSiteProfiles Zinc finger Dof-type profile. 19 73 IPR003851 GO:0003677|GO:0006355
Aev03g0065 260 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 193 IPR045174 GO:0003700|GO:0006355
Aev03g0065 260 MobiDBLite consensus disorder prediction 64 86 - -
Aev03g0065 260 PANTHER OS06G0284500 PROTEIN 6 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0065 Aev-Chr3 721118 721900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0065 18 112 C2C2-Dof Transcription Factor Family AT5G60200 55.208 5.16e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev03g0065 zf-Dof 6.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0065 - - gmx:100791855 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0065 03 721118 721900 Aev04g0612 04 3776781 3777638 PCT