Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2212 ATGGGAGGAGGGAGCAGGTTCTTCGGCGGCGGCGCAGGTGCCGGAGACAGGAGGCTGAGGCCCCACAGCCACCATACTCAGAGCAACAGCCACCACCACCAGGCAGCACTCAAGTGCCCTCGCTGCGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCACGCCACTTCTGCAAAAACTGCCGCCGCTACTGGACCAAAGGCGGTGTCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGTCCAAACGCTCCTCCAACACCAAAACAAAAACCACCACTTCTACCTCCGAAACGACGTCGTCTCAGCAGCAGACACCGGAACAGAAGTCCAACTCCCACTCTAGCAGCGAGAGTTCAAGCCTCACCGCCGCCACCACCACCGCCGCGGCGGTGACGGAGCTGAACTCTGACTCTTCGAACAACCACCTGCACGATTCGAAGTTGTTGATCCCTTCTTCAAACCCTGGCTTGGAGAGTGGTGGTCCTCTGGAGCAAGGTGCAGGGGACTGTGGTGGAATCTTCTCTGAGATTGGAACCTTCTCGAGCTTGATCGCTTCTTCTACTTCCAACAACGACGCATTGGCGTCGTTTGGGTTCGGTAGTGGTGATACGGCGTCGTTTCAGTGGCAACACCACCAGAAGTTGAACGAGAGTTTGAGTGGTTCTGGTGGGAATTTGCTGGATCATCATGGGCATGGTAGTGCATCAATCACCGTTGATTTGTCGGCGCTGCAGGGTAAAACGGGAAACGGAGGATTTGGACCGTTAGATTGGCAGGGAGGTGCGGATCAAGGTTTGTTTGATCTTCCTAACGCCGTTGATCAGGCTTACTGGAGTCAAACTCAATGGCCTGATCAGGATAATTCTTCACTCTTTCATCTCCCCTGA 912 0.5559 MGGGSRFFGGGAGAGDRRLRPHSHHTQSNSHHHQAALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSNTKTKTTTSTSETTSSQQQTPEQKSNSHSSSESSSLTAATTTAAAVTELNSDSSNNHLHDSKLLIPSSNPGLESGGPLEQGAGDCGGIFSEIGTFSSLIASSTSNNDALASFGFGSGDTASFQWQHHQKLNESLSGSGGNLLDHHGHGSASITVDLSALQGKTGNGGFGPLDWQGGADQGLFDLPNAVDQAYWSQTQWPDQDNSSLFHLP* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2212 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 290 IPR045174 GO:0003700|GO:0006355
Aev01g2212 303 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Aev01g2212 303 MobiDBLite consensus disorder prediction 1 36 - -
Aev01g2212 303 PANTHER DOF ZINC FINGER PROTEIN 4 17 290 - -
Aev01g2212 303 MobiDBLite consensus disorder prediction 95 156 - -
Aev01g2212 303 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Aev01g2212 303 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Aev01g2212 303 MobiDBLite consensus disorder prediction 81 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2212 Aev-Chr1 26408401 26409312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2212 16 303 C2C2-Dof Transcription Factor Family AT5G60850 43.854 7.08e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev01g2212 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2212 - - adu:107468949 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2212 01 26408401 26409312 Aev01g2212 01 26408401 26409312 ECH