Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2131 ATGCAGCAAAGCATTAGAGACCCTGCTATCAAGCTCTTCGGTCAGAAGATTCCCTTGCCCGGTGACCCAGATATTCCTTCCGCCCATGACCCTCCCTCGCCGGCGCCTATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATGATGAAGAAGAAGAAGAAGAATATGAAGAAGAGGAGGATGAGGACGTAGAACCCCATGACACTGAAGGGGAGAAAGACCAAGGAGACAAGGATCCAGCAGCTGAAAATGTTACTGAGAAAGAGTTAGAGGGTGATCCTCCTCCTAATGCTGAAGACAGTAATAATTCAGCCATATCACCTGAGGCCATGGTGAATCCGAAAACACCTGCCATAGAAAAGGAAGAAGCTGCAAAATCGAAAAGTGATAAGTCAGAGAAGGAACAAGGTGATGCGTCCAATTCACAAGATCAGAAACCACTAAAGAAGCCTGATAAGGTACTTCCATGTCCCCGCTGCAACAGCATGGACACTAAATTCTGTTACTACAACAACTACAACGTCAACCAGCCACGTTACTTCTGCAAAGCTTGTCAAAGATACTGGACTGCCGGTGGCACCATGAGGAACGTGCCAGTTGGGGCAGGACGACGAAAGAACAAGAACTCTGCCTCCCATTATCGCCACATCACGATCTCTGAGGCTCTTCAAGCAGCTAGAATTGATGCACCTAATGGGACTCATCTCCCAGCACTGAAAACCAATGGTAGAGTTCTCAGCTTTGGAATAGATGCACCAATTTGTGATTCCATGGCATCTGTCCTCAATCTTGGAGACAAAAAGGTTCTTAATGGCACGAGAAATGGGTTCCATCATGGCTTTGATGATCAAAGAATAAGCGTTCCATGCAAAAGTGGGGAAAATGGCGACGACTGCACAAGTTCATCTTCAATTCCGGTTCCAAATTCAACGGGAGAGAGTAACAAAAGCACCTTCCCAGAACCAGTACTACCACCGAACAATGGTTTCCTTCCTCCAGTTCCATGCCTCGCTAGTGTTCCTTGGCCTTATCCATGGAATGCTCCAGTTCCCTCACCTGCTATGTGTCCTTCAGGATTTCCACTTTCATTCTATCCTCCCCCTTTTTGGAACTGCAGCATGCCAGGGAATTGGAATGTTCCTTGGTTTGCCCCGCAGTCCTCTTCTTCAAACCCGCTTTCACCAGGCTCTGGTCCGAATTCCCCCACTTTAGGGAAGCACTCCAGGGATGGTGACATGGTTAACCAAGACTCCTTGAGCAAAGAAGAGCCGCCAAAGCAAAGAAACGGGTGTGTTTTGGTTCCCAAAACATTGCGAATCGACGACCCAAATGAAGCTGCAAAGAGTTCAATATGGGCAACTCTAGGAATCAAGAACGAATCAGCCAGTGGGAAAGGCATGTTTAAGGCCTTCCAATCAACCAAAGAAGAAAAGAACCATGTTGAAGCTTCTTCTGTGTTGCGGGCTAACCCTGCAGCGCTGTCTCGATCCCTCAATTTTCATGAGAACTCATGA 1518 0.4723 MQQSIRDPAIKLFGQKIPLPGDPDIPSAHDPPSPAPMEEEEEEEEEDDDDEEEEEEYEEEEDEDVEPHDTEGEKDQGDKDPAAENVTEKELEGDPPPNAEDSNNSAISPEAMVNPKTPAIEKEEAAKSKSDKSEKEQGDASNSQDQKPLKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDAPNGTHLPALKTNGRVLSFGIDAPICDSMASVLNLGDKKVLNGTRNGFHHGFDDQRISVPCKSGENGDDCTSSSSIPVPNSTGESNKSTFPEPVLPPNNGFLPPVPCLASVPWPYPWNAPVPSPAMCPSGFPLSFYPPPFWNCSMPGNWNVPWFAPQSSSSNPLSPGSGPNSPTLGKHSRDGDMVNQDSLSKEEPPKQRNGCVLVPKTLRIDDPNEAAKSSIWATLGIKNESASGKGMFKAFQSTKEEKNHVEASSVLRANPAALSRSLNFHENS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2131 505 ProSitePatterns Zinc finger Dof-type signature. 158 194 IPR003851 GO:0003677|GO:0006355
Aev01g2131 505 MobiDBLite consensus disorder prediction 411 425 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 36 69 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 289 324 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 1 156 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 120 154 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 387 431 - -
Aev01g2131 505 PANTHER CYCLIC DOF FACTOR 1 1 504 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 387 405 - -
Aev01g2131 505 Coils Coil 40 63 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 70 96 - -
Aev01g2131 505 MobiDBLite consensus disorder prediction 295 323 - -
Aev01g2131 505 ProSiteProfiles Zinc finger Dof-type profile. 156 210 IPR003851 GO:0003677|GO:0006355
Aev01g2131 505 PANTHER CYCLIC DOF FACTOR 2 1 504 IPR045174 GO:0003700|GO:0006355
Aev01g2131 505 Pfam Dof domain, zinc finger 153 210 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2131 Aev-Chr1 25691102 25693563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2131 1 503 C2C2-Dof Transcription Factor Family AT3G47500 46.422 1.23e-119 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev01g2131 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2131 - - gmx:778113 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0412 03 2985869 2988638 Aev01g2131 01 25691102 25693563 ECH
Aev01g2131 01 25691102 25693563 Aev01g2131 01 25691102 25693563 ECH
Aev03g0412 03 2985869 2988638 Aev01g2131 01 25691102 25693563 PCT