Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2015 ATGGGTTTCTCTTCTCTTCACGTCTGCATGGAATCATCTTCAGATCATTGGCTTCAGGGCACAATTGAGGAGGAATCATCAGGAGGGATGGATTCTTCACCTTCACCTTCACCAATATCAATATCATCATCTGCTGCTGCAGCAGGGGACATGAACATGATTGGATGCTCAACAATTAGGCCAATGATGATGACAGAGAGGAAGCTAAGACCCCCACAAGACCAATTAGCTCTGAAATGTCCAAGGTGTGACTCAACTCACACCAAATTCTGTTACTACAACAATTACAGTCTGTCTCAGCCAAGGTACTTCTGCAAAGCCTGCAGAAGTACTAATGCAGGGGCATTGATGGAAAATCCTGATTTTATGGTGGAGAGCAAGTATAATAATAATAATATGGGTATGATGATTAGAAGTTCTTCTAGGAATCTTGATTTGTTTGGTGTTGGAGATAATGTGATGATGAGTGGTTACAACAATAGTAATAATAATATTAATGTGTTGCAATCACCAAATAATTATCTAGGGTTTTGTTCTTCATCAGCAGCAGCATTTGGGGGAATTTCTCTTATTGATGGGAACAACATAATGGAGTCTTGCCACCAGAGATTGATGTTGCCTTATGGTTCTTCATCATGTGATAATGATGAACAAATTAATAGTAATAATTATAGTTTGATTGATGTGAAGCCAAACCCTAGGGTATTGTCCCTTGAATGGCAAGACAATATGATGCAGGGTGGTTGCTCTGATGGAAAAGAGACATTTGGGTGTATTGATGGTCCAGGATCATGGAATAATGGTGTCATCAACGGCTATGGATCTTCCGCAACAAACCCTTTGGTCTAG 849 0.4005 MGFSSLHVCMESSSDHWLQGTIEEESSGGMDSSPSPSPISISSSAAAAGDMNMIGCSTIRPMMMTERKLRPPQDQLALKCPRCDSTHTKFCYYNNYSLSQPRYFCKACRSTNAGALMENPDFMVESKYNNNNMGMMIRSSSRNLDLFGVGDNVMMSGYNNSNNNINVLQSPNNYLGFCSSSAAAFGGISLIDGNNIMESCHQRLMLPYGSSSCDNDEQINSNNYSLIDVKPNPRVLSLEWQDNMMQGGCSDGKETFGCIDGPGSWNNGVINGYGSSATNPLV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2015 282 Pfam Dof domain, zinc finger 77 116 IPR003851 GO:0003677|GO:0006355
Aev01g2015 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 118 270 IPR045174 GO:0003700|GO:0006355
Aev01g2015 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 109 IPR045174 GO:0003700|GO:0006355
Aev01g2015 282 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 38 109 - -
Aev01g2015 282 ProSiteProfiles Zinc finger Dof-type profile. 78 130 IPR003851 GO:0003677|GO:0006355
Aev01g2015 282 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 118 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2015 Aev-Chr1 24848310 24849892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2015 1 120 C2C2-Dof Transcription Factor Family AT5G62940 49.624 3.16e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev01g2015 zf-Dof 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2015 - - pop:7456845 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2015 01 24848310 24849892 Aev08g2258 08 21802688 21803748 PCT