Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0538 ATGGCTACTACAATATCAACTTTCATTATCTTCCTTTTCTTCACTTCGACATTAGCCATGGACAATCATTCCAAATCGAGAACCAACGAGGAGGTCATGGCCATGTACGAAGAGTGGTTGGTGAAGCACCAAAAAGTGTATAATGGGTTGGATGAGAGAGACAAGAGGTTTCAAGTTTTTAAGGACAACTTGGGATTCATCGATGACCATAACTCCCAAAACAACACATACAAACTTGGCTTGAATAGCTTCGCTGATTTAACCAATCAGGAATATAGAGCCATGTATTTGGGTACTAAGATTGATGCCAAGCGTAGGGTCATGAAAGCCAAGACTACCGGCCATCACCGGTATGCTTATAGTGCCCGTGACCGGTTACCGGTTCATGTGGATTGGAGGTTGAAAGGTGCTGTTGCTCCAGTCAAAGATCAGGGAGGTTGCGGAAGTTGTTGGGCATTCTCAACGGTAGCCACCGTAGAAGCCATAAATAAGATAGTCACAGGGAAGCTTGTCTCTTTGTCGGAACAAGAGCTCGTAGATTGTGACAGACTCTACAACGAAGGATGCAATGGCGGTCTCATGGACTATGCCTTTGAATTCATCGTTGCAAATGGTGGCATTGACACAGAGGAAGACTATCCATACCAGGGCTATGAAGGCAGATGTGATCCAACCAGGAAGAATGCTAAGGTAGTTAGCATTGATGGGTATGAGGATGTTCCACCAAATAATGAGAAGGCCTTAAAGAAAGCTGTGGCTCATCAACCTGTTAGCGTTGCTATTGAAGCCTCTGGCAGAGCCTTGCAACTCTATCAATCGGGTGTATTTACTGGTACATGTGGAACAGACTTAGACCATGGTGTGGTTGTTGTTGGATATGGAACTGAAAATGGCGTTGATTATTGGCTTGTGAGGAACTCATGGGGTAAAGGCTGGGGTGAGGAAGGCTACTTCAAGCTGCAGCGCAACACGGCGCGCGCTTCTACCGGGAAATGTGGAATTGCGATGCAGGCCTCATATCCGGTGAAGAATGGCGCAATCCGAAATTCAGCTAATGATGAGAGCGAGAAGATTAGCAGTGCTTGA 1086 0.4595 MATTISTFIIFLFFTSTLAMDNHSKSRTNEEVMAMYEEWLVKHQKVYNGLDERDKRFQVFKDNLGFIDDHNSQNNTYKLGLNSFADLTNQEYRAMYLGTKIDAKRRVMKAKTTGHHRYAYSARDRLPVHVDWRLKGAVAPVKDQGGCGSCWAFSTVATVEAINKIVTGKLVSLSEQELVDCDRLYNEGCNGGLMDYAFEFIVANGGIDTEEDYPYQGYEGRCDPTRKNAKVVSIDGYEDVPPNNEKALKKAVAHQPVSVAIEASGRALQLYQSGVFTGTCGTDLDHGVVVVGYGTENGVDYWLVRNSWGKGWGEEGYFKLQRNTARASTGKCGIAMQASYPVKNGAIRNSANDESEKISSA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0538 361 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Aev01g0538 361 PANTHER CYSTEINE PROTEASE 19 349 - -
Aev01g0538 361 SMART Inhibitor_I29_2 36 92 IPR013201 -
Aev01g0538 361 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 19 349 - -
Aev01g0538 361 CDD Peptidase_C1A 127 341 IPR039417 -
Aev01g0538 361 SMART pept_c1 126 342 IPR000668 GO:0006508|GO:0008234
Aev01g0538 361 Pfam Cathepsin propeptide inhibitor domain (I29) 36 92 IPR013201 -
Aev01g0538 361 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Aev01g0538 361 SUPERFAMILY Cysteine proteinases 28 342 IPR038765 -
Aev01g0538 361 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Aev01g0538 361 Pfam Papain family cysteine protease 126 342 IPR000668 GO:0006508|GO:0008234
Aev01g0538 361 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Aev01g0538 361 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Aev01g0538 361 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Aev01g0538 361 Gene3D Cysteine proteinases 16 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0538 Aev-Chr1 4854161 4857956 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2524 09 26821578 26823921 Aev01g0538 01 4854161 4857956 ECH
Aev07g0878 07 6069558 6074575 Aev01g0538 01 4854161 4857956 ECH
Aev01g0538 01 4854161 4857956 Aev01g0538 01 4854161 4857956 ECH