Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0536 ATGGCTTCCAGAAGAGACCAACCCCAACAACAACACTCTCCTTCCTTCATCGATGCCCTCCTCTGCGAAGAACAAGACCCTTTTGAAGGTGAAGACTTCGACGCCGGAAACGGCGACGTTCAGAGCGACCCATCATCACCAAATCTCAGAAAGTTTCAATCTTTGCCTCCTTCGGTTCTTCTTGACAATGACCTGTTCTGGGAACATGACGAGCTTTCTTCCTTAATCACCAAAGAGGGAGAGACTCATTCGTGTTCCTGCAACGACAATCTGATCTCTGATGATAAATGGGCCTTGAATGGGTCTCGCGTTGAGGCTATAAGCTGGATTTCCAAAGCCTGTGCTCACTATGGGTTCTCTGCTTTGACCACTGTTCTTGCTGTTAACTACTTTGATAGGTTCATCACAAGCTTCAAGTTCCAGAGAGACAAGCCATGGATGACTCAGCTCGTTGCTGTTGCTTGCTTGTCCATCGCTGCAAAAATGGAAGAGACCCATGTGCCTCTTCTCTTAGACCTGCAAGTCGAGGAATCAAGGTTTGTGTTTGAAGCCAAGACTATACAGAGAATGGAGCTTCTGGTTTTGTCAACTCTTAAGTGGAGGATGCATCCGGTGACCCCGATTTCCTTCTTTGAGCACATTGTAAGAAGGCTTGGCCTGAAGAGTCGCTTGCATTGGGAGTTCTTATGGCGTTGCGAGCGAGTTCTTCTCAATGTCATCTCGGATTCAAGGGTTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCTACTGAGTACATTAATGAACTTCTTGGTCTACTCAAGATTAATGAGGAACAAGTGAACCAGTGCTACAAACTCATACTGAAGCCGTTGCTTTGTGACGAAGGCATTCACAATCTTCACCAGAAACGGAAGCGCGTATCTGAACCAAGTAGCCCGGGTGGTGTCATTGATGCATCTTTCAGCTGCGATAGCTCTAATGATTCATGGACTGTTGCATCATCAGTCTCACATTCAGTGGAGCCACTGTTTAAGAGGAGCAGAGCCAAGGACCAGCAGATGAGATTGCCTTCTGTTAATCGCCTGTCTATTGATGTTCTTAATAGCCCTCGTTAA 1140 0.4588 MASRRDQPQQQHSPSFIDALLCEEQDPFEGEDFDAGNGDVQSDPSSPNLRKFQSLPPSVLLDNDLFWEHDELSSLITKEGETHSCSCNDNLISDDKWALNGSRVEAISWISKACAHYGFSALTTVLAVNYFDRFITSFKFQRDKPWMTQLVAVACLSIAAKMEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCERVLLNVISDSRVMSYLPSTLAAATMIHVIKEIEPFNATEYINELLGLLKINEEQVNQCYKLILKPLLCDEGIHNLHQKRKRVSEPSSPGGVIDASFSCDSSNDSWTVASSVSHSVEPLFKRSRAKDQQMRLPSVNRLSIDVLNSPR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0536 379 SUPERFAMILY Cyclin-like 206 305 IPR036915 -
Aev01g0536 379 Gene3D - 99 203 - -
Aev01g0536 379 Gene3D - 204 293 - -
Aev01g0536 379 MobiDBLite consensus disorder prediction 28 50 - -
Aev01g0536 379 CDD CYCLIN 102 195 IPR013763 -
Aev01g0536 379 Pfam Cyclin, C-terminal domain 205 302 IPR004367 -
Aev01g0536 379 PANTHER CYCLIN-D3-2 8 363 - -
Aev01g0536 379 SUPERFAMILY Cyclin-like 67 203 IPR036915 -
Aev01g0536 379 PANTHER CYCLINS 8 363 IPR039361 -
Aev01g0536 379 Pfam Cyclin, N-terminal domain 87 202 IPR006671 -
Aev01g0536 379 SMART cyclin_7 108 196 IPR013763 -
Aev01g0536 379 SMART Cyclin_C_2 205 333 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0536 Aev-Chr1 4837938 4839438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0536 4 369 Core Cell Cycle Gene Families AT5G67260 49.731 3.82e-112 332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0679 05 4715218 4716568 Aev01g0536 01 4837938 4839438 ECH
Aev08g0372 08 2032808 2034244 Aev01g0536 01 4837938 4839438 ECH
Aev07g0883 07 6117176 6119634 Aev01g0536 01 4837938 4839438 ECH
Aev01g0536 01 4837938 4839438 Aev01g0536 01 4837938 4839438 ECH
Aev01g0536 01 4837938 4839438 Aev05g0679 05 4715218 4716568 PCT