Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1819 ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGCCAACTGGCAGCAACAGCCACCAAATCATCACCAGCAGCAGCAGCAAGGAAACAACAACAGTACTGCAGCCAGCTCTCACGGCCTTATTCTTCCACCACCACCAATACAACCACCGGCGCCAGCTCCGCCATCGAACCCTCATGGACTTGGCGGTGGAGGTAGCTCTACCGCCGGGTCCATCAGGCCAGGTTCGATGGCAGATAGGGCAAGGATGGCCAACATGCAAGAAGCTCAACAAAAGTGTCCAAGATGTGAATCAGCCAACACAAAGTTCTGCTACTTCAATAACTACAGCCTCTCTCAGCCCCGCCACTTCTGCAAGGCTTGCAGAAGGTACTGGACACGTGGCGGGGCCTTGAGGAACGTTCCTGTCGGCGGCGGCTGCCGGAGGAACAAGAGGAGCCGAGGAACCTCCAGCAGCAGCAGCGCCAGGTCGCCGGCAAACTCCGATCGCCAGACCGCGAGTGCCGGCTCGGCTTCCACCACCAGTGGCTCCTCTTCTGCTGACATGGTGGCCGGCCTCGGCGGCGGCGGCACCGGGGTGCCGCCGTCTTTTAGGTTCATGGCTCCATTGCATCAACTTGGGGATCACCACCACCATCACCTTGGTGGTGGCGGAGAAATAGGGTTAAGCTATGGCTTGAACTATGGGGCAATTTCAGGTCCAATGGGAGGAATAGGAGACTTGAATTTCCATATTGGAAACACCTTGAATGGTGGTGGTGGTTCTATGTTGTCTGGTTTGGACCAATGGAGGGTGCCACAAACACACCAATTTCCCTTCTTGTCTGGCTTGGAAGCTTCTTCATCACATGGATTGTATCCATTTGAAGGTGCTAGTGGCAGTGATGGCTATGGTGGCACTCCCATTAAGGTTTCAACTTCTGGAGTTATGTCTCAGCTTGCTTCTGTGAAAATGGAAGACAATAATCACCATCATCAACATCATCATCATCATCAGGAACTTGGTTTGCCTAGACAGTTCTTGGGAATCAATAGTAACAATCCTAACACAAATGAGCAATATTGGAGTGGTGGTGGTGGTGGTGCTACTTCTGCTTGGACCGATCTTTCTGCTTTCAGCTCTTCTTCCACTACTAGTAACCCACTATAG 1152 0.5226 MVYTSIPAYIDPANWQQQPPNHHQQQQQGNNNSTAASSHGLILPPPPIQPPAPAPPSNPHGLGGGGSSTAGSIRPGSMADRARMANMQEAQQKCPRCESANTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRSRGTSSSSSARSPANSDRQTASAGSASTTSGSSSADMVAGLGGGGTGVPPSFRFMAPLHQLGDHHHHHLGGGGEIGLSYGLNYGAISGPMGGIGDLNFHIGNTLNGGGGSMLSGLDQWRVPQTHQFPFLSGLEASSSHGLYPFEGASGSDGYGGTPIKVSTSGVMSQLASVKMEDNNHHHQHHHHHQELGLPRQFLGINSNNPNTNEQYWSGGGGGATSAWTDLSAFSSSSTTSNPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1819 383 MobiDBLite consensus disorder prediction 340 360 - -
Aed9g1819 383 MobiDBLite consensus disorder prediction 12 76 - -
Aed9g1819 383 MobiDBLite consensus disorder prediction 12 39 - -
Aed9g1819 383 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 379 IPR045174 GO:0003700|GO:0006355
Aed9g1819 383 ProSiteProfiles Zinc finger Dof-type profile. 92 146 IPR003851 GO:0003677|GO:0006355
Aed9g1819 383 MobiDBLite consensus disorder prediction 136 188 - -
Aed9g1819 383 ProSitePatterns Zinc finger Dof-type signature. 94 130 IPR003851 GO:0003677|GO:0006355
Aed9g1819 383 MobiDBLite consensus disorder prediction 43 58 - -
Aed9g1819 383 MobiDBLite consensus disorder prediction 145 182 - -
Aed9g1819 383 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 5 379 - -
Aed9g1819 383 MobiDBLite consensus disorder prediction 321 360 - -
Aed9g1819 383 Pfam Dof domain, zinc finger 91 146 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1819 Aed-Chr9 21799375 21801256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1819 1 376 C2C2-Dof Transcription Factor Family AT2G37590 40.155 3.19e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed9g1819 zf-Dof 5.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1819 - - gmx:100796820 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1819 9 21799375 21801256 Aed9g1819 9 21799375 21801256 ECH