Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0596 ATGGGTTTGAGTTCGAAGCAGGTTTTTAATAGTAGAGGGGTTGATTGGAACCAGAGCTTGTTGCAGGCTCAAAACTTGGAACTCCCAAAGCCTCCTCCTATGAGGAAACAACAGCAACAAACTCAGCCGTCAGAGCCTTTGAAGTGTCCAAGATGTGACTCTATTAACACCAAATTTTGTTACTACAACAACTATAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGCAGTGTTCCTGTTGGTGGTGGCAGGAAGAATAAGCGAGCCAAGAAATCAACCACTACAACCAAAGCCACAGCCACAGCCACAACCACTTCATCAAGTGCCAATATGAATATAGACGGTGAGTTGAGTACCAACATCACAATTACTCCTCTTGCAGTGGGTGATCACAAAATCACACCTTCCTCTCTCTATCAATCTTTGTGCCTTTCCCAACAGAATCTGATGAGTACCAACAAAGACTCAGAACAAGGAAAAGAATTTGGTATTGGTAATGGCATCTTTCTGAGTTCAACTGTGCCTTTTCCTCAAAACCAAAGCCTTCTATTCCCCTTCACAACATCAAACTCCTTTGACACAAACCAATGTGCAATATCATCCTCTCTGCGATCCTCCAGTGTGTATAACTATGGTGAAGAGCTTAAAATAATGGAGGAGCCAACCATCAACAGTGTAATGCCAAACACTGGTGGTGGCACCAACACACAGCCATGGGAGATAGCAGCTGCAACAAGTTCTGGCTTGGAAATGCCAAACTATTGGACTTGGGAGGACATTGATTCGTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCCTGA 876 0.4406 MGLSSKQVFNSRGVDWNQSLLQAQNLELPKPPPMRKQQQQTQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRSVPVGGGRKNKRAKKSTTTTKATATATTTSSSANMNIDGELSTNITITPLAVGDHKITPSSLYQSLCLSQQNLMSTNKDSEQGKEFGIGNGIFLSSTVPFPQNQSLLFPFTTSNSFDTNQCAISSSLRSSSVYNYGEELKIMEEPTINSVMPNTGGGTNTQPWEIAAATSSGLEMPNYWTWEDIDSLVSTDLNVPWDDSDIKP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0596 291 MobiDBLite consensus disorder prediction 28 49 - -
Aed9g0596 291 MobiDBLite consensus disorder prediction 105 123 - -
Aed9g0596 291 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 214 IPR045174 GO:0003700|GO:0006355
Aed9g0596 291 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Aed9g0596 291 Pfam Dof domain, zinc finger 46 100 IPR003851 GO:0003677|GO:0006355
Aed9g0596 291 MobiDBLite consensus disorder prediction 85 123 - -
Aed9g0596 291 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Aed9g0596 291 PANTHER OS06G0284500 PROTEIN 19 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0596 Aed-Chr9 4139445 4140320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0596 35 132 C2C2-Dof Transcription Factor Family AT1G07640 52.475 3.12e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed9g0596 zf-Dof 3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0596 - - gmx:778119 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1921 10 23480467 23481747 Aed9g0596 9 4139445 4140320 PCT