Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0318 ATGGAGCTGATGGTTCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAGCTTCGATTCGCCGTGGTTGTTTTCGAGATTATATTGATATTGTCACGGGTGGAGGCTCACAATGCAAAGCCCCACGAACACCAACTTCAATGGGGAGGCTTGGAGAGGAATGCTGAGAACATTGCCTCGCACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGACCTGGTCTCAAGGTGTATTCAATTACCCCACAGGTTTATGAGCCTGGTCACTTGAAACACCTTCAGCATAAAGGTAGGACATTACTTGATGTGTCAACACCATCAAGGCCTCAAGAGGATGCAAAGAAGCCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGGGATTGTCGAGCAATTGGTGATATTGTCAAACTTGGGGAGCCTCCCATGACTTCTCCTGGTTCTCCTTCTTGCGATCCCCATGGTAATCCTCCAATCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGAAGAGCATTGGCTGTTGAGCCTGTCAAGGGAAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCGTGGATATATTGAGGAGGGTGTCTCTGATGCCGACTTGGTTCTTTTGGTAACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGTGAGCGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAAATGAAAGGAAAAGACGGCGTAATCAGGTTACCGAACAAGTTATGGATGAAAAGCTTGGACGAATGGTAACACGTGTGGTGCTTCCTCGTGTTGTCATGCATTCTCGATATCATTATGCGGCGTTCTCAGGAAATTTTTCTGGTTTAGAACTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAAAGACTTCTTATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTCTATTAGAAGATAGTGGATGGTACAAGGCCAATTATAGTATGGCCGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTACCTCCCCTTGCAATCTATGGAAGGGAGCCTACCGTTGCAACACAACACAGTTTTCTGGCTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAGTGGAGATCTCCCTCAGTGGGCTCGGTATTTTCCACAAGCTAATAAGGGTGGACAATCCTCGTTGGCTGATTATTGCACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTCACAGTGCACGAGCACCGGACAGAATGCTAGGTGAAATCAGAGGAAGTAACTCCAGGTGTATGGCTTCATCACTAGTACGCACAGGCTTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAAGTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTGATCTGCCCTGCTTACCATGAGCTCTGTAATACGGACCCAGTAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTCCAACGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGATTTCATGGGAATGATTGCAGTAGACGTTCCTGTCCCAGCAAATGCAATGGCAACGGAATGTGCCTTTCCAATGGGATTTGTGAATGTAAACCTGGCTACACTGGCATTGACTGCTCCACTGCCGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGCTGTTCTGACTATGCGGGATACACATGTCAGAACAGCTCCATGCTCCTATCTAGCCTTTCGGTGTGCAAAAATGTGCTGGGAAATGATGTTTCTGGACAGCATTGTGCACCCAGTGAGCCTAGCATACTACAGCAGCTGGAAGAAGTTGTTGTCATACCCAACTACCACCGATTATTCCCTGGTGGTGCGAGAAAATTATTTAATATATTTGGCAGCTCCTACTGTGATGAGACTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAACGATGGAGACAACAGGCTTCGAGTGTGCCATTCTGCATGCCAATCTTATAATCTAGCATGTGGAGCTTCACTTGACTGCTCTGATCAGACCCTTTTCAGCTGTGATGGGGAAGGGGAGGGTCAATGCACCGGCTCTGGTGAGATGAAATTGTCTTGGTTTAATCGTCTGCGAAGCAGTTTTTCTTTGAGAAATAGTTCCTTGAATGGAATATCTGTAAGATATAGACACCTTTAA 2580 0.4605 MELMVRCTSCALSRFHCKLRFAVVVFEIILILSRVEAHNAKPHEHQLQWGGLERNAENIASHSCIHDQILEQRKRPGLKVYSITPQVYEPGHLKHLQHKGRTLLDVSTPSRPQEDAKKPIRIYLNYDAVGHSPDRDCRAIGDIVKLGEPPMTSPGSPSCDPHGNPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRNERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTHSARAPDRMLGEIRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINKSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYHELCNTDPVAVSGQCPNSCNSNGDCVDGKCRCFLGFHGNDCSRRSCPSKCNGNGMCLSNGICECKPGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDNDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSCDGEGEGQCTGSGEMKLSWFNRLRSSFSLRNSSLNGISVRYRHL 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0318 859 Gene3D - 595 637 - -
Aed9g0318 859 ProSiteProfiles EGF-like domain profile. 634 666 IPR000742 -
Aed9g0318 859 SMART egf_5 637 666 IPR000742 -
Aed9g0318 859 SMART egf_5 595 634 IPR000742 -
Aed9g0318 859 Gene3D Leishmanolysin , domain 2 311 437 - -
Aed9g0318 859 PRINTS Leishmanolysin (M8) metalloprotease family signature 400 429 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed9g0318 859 PRINTS Leishmanolysin (M8) metalloprotease family signature 247 276 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed9g0318 859 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 602 - -
Aed9g0318 859 Gene3D Leishmanolysin domain 4 501 594 - -
Aed9g0318 859 Gene3D Leishmanolysin domain 3 440 499 - -
Aed9g0318 859 ProSitePatterns EGF-like domain signature 2. 654 665 IPR000742 -
Aed9g0318 859 ProSitePatterns EGF-like domain signature 1. 654 665 IPR000742 -
Aed9g0318 859 Pfam Leishmanolysin 173 598 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed9g0318 859 Gene3D - 113 302 - -
Aed9g0318 859 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 830 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed9g0318 859 Pfam EGF-like domain 638 665 IPR013111 -
Aed9g0318 859 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 830 - -
Aed9g0318 859 Gene3D Laminin 638 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0318 Aed-Chr9 2224865 2232500 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0318 9 2224865 2232500 Aed9g0318 9 2224865 2232500 ECH
Aed11g0147 11 1121847 1130872 Aed9g0318 9 2224865 2232500 PCT