LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0310	ATGGAGCGGTTTTATTCTTCTCAACGAGAGAGCGTTCTTTTAGGGTATAATAATAATAATAATAATTATGATAATCACAATAATTCTCTGATTCGAAGGTCGTCGTCGTCGAGCAATTCGAACATGGAGGTTGATTTCACCGACGTGTTTGGGGGGCCGCCGCGGCGGTTGTCGATGAACGAAGCGCGGCAGAGTCAGAGTCAGAGTTTGAGTGAAGAGGAAGAGGGAAGTGGTTGGTGTAGGTGGCCGCCGGAGCGCGAAAAACCGGTGTTTGGTGAGGATAGTGGAAACCACCGGAGGCGTCATCACGCAAACAAGAACAGTGACTTCTTCGATGACATATTCGGAGGGGATGAATCGGCGGCGAGTGTGTGTTCCACGCCAAAAAAGCGCGTTGGGGAGTCTTTCGCGTCGTCACGAGCGTCAAGCCCTCTGCCTCCCGCGGCGGAACCCCTTGTTGGCTCTCTCCCTGTAACCTTCAGCCTTCCTGCCACGTTGACAAACGGGGTGGACCTTCCAACATTTGGTTCTCCCACTAGGAGTATGAACCTCCTCAACAACATCAACGATGTTATTGTTGCTTCAAATGGATTAAAACCTTACCGACAAAGTCTTCTATCACAGGAGTTTTCAAACTCTAGCACATCTGATAAAGCAGACAAAGGAAGCATTATGAAACAAGACATATCTATTAGTGAAGTTTCGCCTAGTGCTAGTAATGGCCAGTTTCATTTCTCAATTTACAAATGGGCAAGTAAAGGGGTGCCAATGGTGATGCCTCTTAGGACAGAGAGAAACTCAAGGAATAAATATAAGGCTAAACTTGAGAGATGCTCAAGTGCCAAGGAATGGATAGTCAATGAAAATACCACACAGAGTCCTATAGAATGCAGTGGCTCAGATTCAAATCAAATTGTAGAACATATAGTTTCTGCCAAAACTCAATCAGATACATCAAGCAGCTCTCAAACTGTTACTAGAGATGTTCCTGCTAGTTCTATCTCGCGTGACGCTAGAGAAGTAGAATCAAGTACTCATTCTACAAGTGAGACTGGAAAAACTGAGGCAGCAAAGGAAACTCAGAAGCTTGAGCCCAAACCATTACAGTTTCTGTTCAAAGGAAGTGATAAGAAACAAGATAATGATGAGATGATTACAAGGGAGAGAGAAGAAAACAGGATGAAAAGCACAAAAAAGTTATCTGCTGTTTTTGATGTTACCGTGAATCCAATGAAAGAAGAAAAAACTGTTCCCTTGAGAGATGTAGGACGTAGCAAAGCCACTTCCCAGGGTTCAGTAAGCTTAGGCGAGAATACGGGGAAAGGCCTAGTGAAAGGAAAGGTCAAAGAATTCGCTCGAATTTTCAACCAAGAAACTGTAACAAAACCCAAAGTTGACTCAAAATCTCGACCTCAGGGTTCTACATACAAGAAGAGAGATGCTTCAAGGACAAAGAAGGAAGTGGAAGGTGGTCTTGAACAATCGAAGAAAGATAACTCTGCCACAGAGGCCACCAACATCTCTGCTAATAATTTCTCTCATCAAGATGATATATCAGAACCAGAAATTGCTGATATATCATTTACTATTATTGAAGATAAAGACGACTCCTTCCACGGGAGTTTCATGATACAAGTATTAGCCGAAGATGAGGGTGAGGTCTTACAAAACCAAGAAAATCAAGAAATCCAAACGATTGACAACAAGATAAAACAATGGTCTAAAGGGAAGGAAGGAAACATACGCTCCCTGCTATCGACATTACAATACGCACTTTGGCCGAAGTGTGGTTGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCGGTGAAAAGATCTTATCAAAGGGCTTTACTCTGTCTGCATCCTGATAAGTTGCAGCAAAAGGGTGCTTCTTCAGACCAAAAATATATTGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGCTCGGTGCACTCTAA	1986	0.4305	MERFYSSQRESVLLGYNNNNNNYDNHNNSLIRRSSSSSNSNMEVDFTDVFGGPPRRLSMNEARQSQSQSLSEEEEGSGWCRWPPEREKPVFGEDSGNHRRRHHANKNSDFFDDIFGGDESAASVCSTPKKRVGESFASSRASSPLPPAAEPLVGSLPVTFSLPATLTNGVDLPTFGSPTRSMNLLNNINDVIVASNGLKPYRQSLLSQEFSNSSTSDKADKGSIMKQDISISEVSPSASNGQFHFSIYKWASKGVPMVMPLRTERNSRNKYKAKLERCSSAKEWIVNENTTQSPIECSGSDSNQIVEHIVSAKTQSDTSSSSQTVTRDVPASSISRDAREVESSTHSTSETGKTEAAKETQKLEPKPLQFLFKGSDKKQDNDEMITREREENRMKSTKKLSAVFDVTVNPMKEEKTVPLRDVGRSKATSQGSVSLGENTGKGLVKGKVKEFARIFNQETVTKPKVDSKSRPQGSTYKKRDASRTKKEVEGGLEQSKKDNSATEATNISANNFSHQDDISEPEIADISFTIIEDKDDSFHGSFMIQVLAEDEGEVLQNQENQEIQTIDNKIKQWSKGKEGNIRSLLSTLQYALWPKCGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVFDILQEAWTQFNMLGAL	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	312	331	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	471	496	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	50	108	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	312	368	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	461	504	-	-
	Aed9g0310	661	Gene3D	DnaJ domain	557	660	IPR036869	-
	Aed9g0310	661	SUPERFAMILY	Chaperone J-domain	517	655	IPR036869	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	59	74	-	-
	Aed9g0310	661	PANTHER	J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1	1	655	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	333	362	-	-
	Aed9g0310	661	MobiDBLite	consensus disorder prediction	78	108	-	-
	Aed9g0310	661	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	1	655	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0310	Aed-Chr9	2166748	2173001	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed9g0310	9	2166748	2173001	Aed9g0310	9	2166748	2173001	ECH
	Aed11g0105	11	822759	829717	Aed9g0310	9	2166748	2173001	PCT