Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0263 ATGATGTACTGTAGAGGAATTCCTGTATGGTTGAAGTATGTTCCTGGCATAAGCTTCAGAACGGATAATGAGCCTTTCAAGGCGGCAATGCAAGGGTTCACGCAGAAAATTATCCAGGTGATGAAGAGTGAGAAGTTGTTTCAGTCTCAGGGTGGTCCAATCATTATCTCTCAGATTGAGAATGAGTATGGACCAGAGAGTAGGGGATCCGCTGGTCGTGCATACGTAAGCTGGGCTGCAAGTATGGCTGTTAAATTGGATACAGGAGTGCCCTGGGTGATGTGCAAGGAAAATGATGCTCCAGATCCTGTGATAAACTCATGTAATGGTTTTTACTGTGATGAATTCTCTCCAAATAAACCATACAAGCCTACCATGTGGACTGAGACTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAATTCACCAGCGACCAGTTGAGGATCTATCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATGTGAATTATTACATGGCTCATGTATTCTCTTCAGGGACTGGAACATGTGCAGCTTTTCTAGCAAACTCTAATGCACAGTCAGCTGCTACTGTGACATTCAATAACAAGCACTATGATTTACCTGCTTGGTCCATAAGCATCCTCCCTGATTGCAAAACTGACATATTTAATACTGCAAAAGTGGGAGTTCAATCTTCACAGGTGAAAATGCTTACTCTAAATACTAAGTCGTTCTCATGGGAGAGTTATGATGAAGATCTATCTTCTCTGGCCGAGATTTCGAGGATTACAGCTCCTGGACTCTTAGAACAGTTGAATGTTACTAGAGACAGCAGTGACTATCTATGGTACATAACCAGCATTGACATAAGCTCATCAGAATCCTTTCTTCGAGGAGGACAAAAGCCCAGCATTAATGTGCAGTCTGCAGGACATGCTGTACATGTGTTTGTTAATGGGCAATTTTCAGGGTCAGCTTTTGGGACAAGGGAGCAGAGAAGTTGCACATTCAATGGACCCGTTGACCTCCGCGCTGGAACAAATAAAATTGCTCTTCTCAGTGTCACTGTTGGATTACAAAATGTTGGTCGGCATTATGAAACATGGGAGACAGGTATCACTGGTCCAGTTTTGCTCCAAGGTCTTGACCAAGGACAGAAAAACTTGACGTGGAATAAGTGGTTATATAAGGTTGGCCTAAGAGGAGAGGATCTGAATTTGGTGTCTCCCAATGGGGTCTCATCTGTTGATTGGGTCCAAGAGACACTAGCTACTCAAACTCGGTCACAGTTGAAATGGTACAAGGCTTATTTTGATGCACCCGGGGGAAACGAACCATTGGCTTTGGACCTAGAAAGTATGGGTAAGGGTCAAGTATGGATAAACGGGCAGAGCATAGGGAGATATTGGACAGCTTATGCAAAGGGTGACTGTAATTCTTGCACTTATGCTGGGACCTTCCGCCCTGTAAAGTGCCAACTTGGTTGTGGACAACCCACTCAACGATGGTATCACATTCCAAGGTCCTGGCTAAAGCCAACAAAGAACTTGATAGTAGTGTTTGAAGAATTAGGTGGGAATCCTTGGAAAATATCTTTGGTAAAGAGAGCGGTACATACTCCGGCAGTTCATGGGCAGTGA 1632 0.4412 MMYCRGIPVWLKYVPGISFRTDNEPFKAAMQGFTQKIIQVMKSEKLFQSQGGPIIISQIENEYGPESRGSAGRAYVSWAASMAVKLDTGVPWVMCKENDAPDPVINSCNGFYCDEFSPNKPYKPTMWTETWSGWFTEFGGPIHQRPVEDLSFAVARFIQKGGSYVNYYMAHVFSSGTGTCAAFLANSNAQSAATVTFNNKHYDLPAWSISILPDCKTDIFNTAKVGVQSSQVKMLTLNTKSFSWESYDEDLSSLAEISRITAPGLLEQLNVTRDSSDYLWYITSIDISSSESFLRGGQKPSINVQSAGHAVHVFVNGQFSGSAFGTREQRSCTFNGPVDLRAGTNKIALLSVTVGLQNVGRHYETWETGITGPVLLQGLDQGQKNLTWNKWLYKVGLRGEDLNLVSPNGVSSVDWVQETLATQTRSQLKWYKAYFDAPGGNEPLALDLESMGKGQVWINGQSIGRYWTAYAKGDCNSCTYAGTFRPVKCQLGCGQPTQRWYHIPRSWLKPTKNLIVVFEELGGNPWKISLVKRAVHTPAVHGQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0263 543 Gene3D - 245 391 - -
Aed9g0263 543 PANTHER BETA-GALACTOSIDASE RELATED 5 171 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 PANTHER BETA-GALACTOSIDASE RELATED 170 542 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 SUPERFAMILY (Trans)glycosidases 5 172 IPR017853 -
Aed9g0263 543 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 51 63 IPR019801 GO:0004553|GO:0005975
Aed9g0263 543 PRINTS Glycosyl hydrolase family 35 signature 453 469 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 PRINTS Glycosyl hydrolase family 35 signature 163 178 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 PRINTS Glycosyl hydrolase family 35 signature 426 440 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 PRINTS Glycosyl hydrolase family 35 signature 126 141 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 PRINTS Glycosyl hydrolase family 35 signature 49 64 IPR001944 GO:0004553|GO:0005975
Aed9g0263 543 SUPERFAMILY Galactose-binding domain-like 209 380 IPR008979 -
Aed9g0263 543 Pfam Beta-sandwich domain in beta galactosidase 164 225 IPR041392 -
Aed9g0263 543 Gene3D - 405 539 - -
Aed9g0263 543 Pfam Glycosyl hydrolases family 35 6 171 IPR031330 -
Aed9g0263 543 PANTHER BETA-GALACTOSIDASE 5 171 - -
Aed9g0263 543 PANTHER BETA-GALACTOSIDASE 170 542 - -
Aed9g0263 543 Gene3D Glycosidases 1 207 - -
Aed9g0263 543 SUPERFAMILY Galactose-binding domain-like 388 536 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0263 Aed-Chr9 1876480 1880764 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0263 9 1876480 1880764 Aed11g1249 11 17666233 17672226 ECH
Aed9g0263 9 1876480 1880764 Aed9g0263 9 1876480 1880764 ECH
Aed11g0084 11 686472 692084 Aed9g0263 9 1876480 1880764 PCT