Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0203 ATGGTTACCACCACCGTTGATTCTTCCTCTAACCATCACTCGCCCACCGCTGCCGCCGCTGCTGCTGCTGATACCTCCAATAACTTCCCACGGAAAAACCTGCCTTCTCCGTGGGCCCAGGTGGTTCGCGGTGCTGACGCTGAACCTAACCATCAATCGCCCCCATCTTCTTCCTCTTCATCGTCTCTCGATTCCATTAATTCCAACGGTCCTGCCGTTCAAACCAGCGATGCCGCTGTGAAACCTGCGTGGAAGAAACCGGAGTCCAACGGCGTCGCTGAAGTTGGGCCTGTAATGGGTGCTCATTCTTGGCCCCATTTATCTGAGTCCACCAAGCCCACAGCTAAATTGACATCTGACTCCTCTGTTAAGACTGCTACTGATGAAGAGTCACTCACCACTCCTCAGGGTCCTGTTATTTTAGACTCCCCCCAGAAACAAGCCACTGGTAATGCAAAGCCTAGTCCTGCAATGAACTATGGTCCGACTAATAGACAAAAATCAATGAAGCAGCGTGGAGGGGCAAATGGCAATAATGTTGGGTCTGGTCCTGTTCAGAACAACTTCTCCGGTGCTACCCCAAATCTTCCTCCACCTCCACCGCCACCTCCCTTTCCTGTGCTTCCCTTGCCTCCAAGTTCATTTGCCCATGGGATGCCAGGGGTTACAGTTCCTACTCCAAGGGGGGATCCTTACAGGAACAATAATTGGGATTCAAGACCTCCTCCGCTTGGGGGTTTTATGCCACCAATGAATGAGCATAGGAGTCCCTCTCGCAGGGGAAATGCAGGGCACCATCCACGTGGAGACGGTTCCTATCATAACAGTTATGGCAATAGGCGTGATCAGGACCGTGGGAGTTATGCAAATACCAGAGATGCTCATGTAAATCAACAGAGGATGTCTCCAAGGGGATTGATGAGGCCCCCGCCACCTAATCCTGCTCCATTTATGGGGCCTCAGCCCATGCGACCCTTTGCAAACCCTGCTGGGTTTCCTGAATTCTATTATTTCCCAACACTACAATTTGAACCCTTTGGGGGCATGCCATTTTTCACACATGCACCTTCTCCTGCAATGTTCTTCCCGGTTGCAGAAACTCCTCTCACCAATACAATAGTCAACCAAATTGATTATTACTTTAGTGATGCTAATTTAGTGAAGGATGAGTATTTAAGGTCCAACATGGATGAACAGGGATGGATTCCTATTACTTTGATTGCAAGCTTCCCACGTGTTAGAAGTTTGACCAGCAACGTTAAGTTGATATTGGATTCATTGAGAACCTCCACCATCGTGGAAGTGCAAGGAGACAAGTTGAGGAGGCGCAATGATTGGATGAAGTGGCTTCCCTCTGCTCAACTTCGGACCAACTCTGGTTCATTATCCCCTAGCGGATCAAGTTCTAATAACCTAGCAGCTGATTTTGAAAAGATCGCAGTGGATGAAGTTAATGCCGAGCCTACCACAAATGATGATGATGCAGAAGTGTCCTCAACTCAGTCGCATGTCCCAAGTGATACTGCTGCGAGCAGCAATTAA 1542 0.4916 MVTTTVDSSSNHHSPTAAAAAAADTSNNFPRKNLPSPWAQVVRGADAEPNHQSPPSSSSSSSLDSINSNGPAVQTSDAAVKPAWKKPESNGVAEVGPVMGAHSWPHLSESTKPTAKLTSDSSVKTATDEESLTTPQGPVILDSPQKQATGNAKPSPAMNYGPTNRQKSMKQRGGANGNNVGSGPVQNNFSGATPNLPPPPPPPPFPVLPLPPSSFAHGMPGVTVPTPRGDPYRNNNWDSRPPPLGGFMPPMNEHRSPSRRGNAGHHPRGDGSYHNSYGNRRDQDRGSYANTRDAHVNQQRMSPRGLMRPPPPNPAPFMGPQPMRPFANPAGFPEFYYFPTLQFEPFGGMPFFTHAPSPAMFFPVAETPLTNTIVNQIDYYFSDANLVKDEYLRSNMDEQGWIPITLIASFPRVRSLTSNVKLILDSLRTSTIVEVQGDKLRRRNDWMKWLPSAQLRTNSGSLSPSGSSSNNLAADFEKIAVDEVNAEPTTNDDDAEVSSTQSHVPSDTAASSN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0203 513 Pfam La domain 373 428 IPR006630 -
Aed9g0203 513 MobiDBLite consensus disorder prediction 491 513 - -
Aed9g0203 513 Gene3D - 363 452 IPR036388 -
Aed9g0203 513 MobiDBLite consensus disorder prediction 50 75 - -
Aed9g0203 513 ProSiteProfiles La-type HTH domain profile. 363 452 IPR006630 -
Aed9g0203 513 MobiDBLite consensus disorder prediction 107 192 - -
Aed9g0203 513 MobiDBLite consensus disorder prediction 193 213 - -
Aed9g0203 513 SMART la 367 445 IPR006630 -
Aed9g0203 513 PANTHER LUPUS LA PROTEIN-RELATED 8 502 IPR045180 -
Aed9g0203 513 CDD LAM 373 443 - -
Aed9g0203 513 MobiDBLite consensus disorder prediction 1 287 - -
Aed9g0203 513 MobiDBLite consensus disorder prediction 478 513 - -
Aed9g0203 513 SUPERFAMILY "Winged helix" DNA-binding domain 360 451 IPR036390 -
Aed9g0203 513 PANTHER LA-RELATED PROTEIN 1B 8 502 - -
Aed9g0203 513 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0203 Aed-Chr9 1430554 1435549 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0203 9 1430554 1435549 Aed9g0203 9 1430554 1435549 ECH
Aed11g0031 11 199443 204378 Aed9g0203 9 1430554 1435549 PCT