Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2462 ATGCAAGGGAAGAGAGGTACAGTTGGTTCAATGCCTGAAACCTTAGAATTTGATTGTGGATCTGCCTCAGGTAATTCTACTGCAGATCAGCCGATTTGCTGGAATAATGTGAATCCTGCAGAACATCAAATACCTGATTATATACTTTTTCCTGGTGATATGAACTCATCTTATGAGAATTCTATTATTAATCATGAATGGAAAAATTTGAGTGGATGGAGCTTAGGGGAGCCATGTCCCAGTAATACACCAAATGAGATTAACAATAATGAGCAAGAAAGAGAACTTGGAGGCTCATCAGTCATTACTGCTGGTGCATTGGCTGGTCCAAGACTAGAAGAAAGGCACCTTCAACAAATCAATGCTCTCTCACTAGACAATGTCAATACAGGTCCTATGTACACACATAGCCCCAATTCTCGTTTGATGCCCCAGAATCTCAACTTGAATGCAGGTTTAGTGGACAGTGGCAGTCATAATAGTCAACATCTGGAACTCCCTAACTTAAACAAGTCTAGTGGATCAGTAAATGAGTGTGTACCACCTCATGTTGGATCTGGTTCTTTTCTGCTTCCTTCAGGAAATAATGGCTTCCTTGTAGGAGATACTGATGGTAGGCCAGGTTGTTCTCCTGATACTCGACGTGTCTCTTGTAAAAGAAAGGCTGTTGAAGGAAATAATGGACCATCCTCAGATGCAGGTAGTTCTAGCTACAGTCAGCGTACAGATGGCAGTGCTTGGCACACAATTCCTACTCAGGATAATGCTGAAAGCAGTTCAAGCAGATCTATTTTCTCAGAACAGGTCAACGCAAGACTTGGCCTGGGTATGGGGGATGAAACATCTGAAAATGTTCCTGATTCAAACATTGCAAGAAGCTCAGAAAGCTTTCCCAGGAATTTCCGTTTGAGGTTAAATCCTTCAAACCCACAGAATTCGGCTCCTCCCACTGCATTCTCAACTGAGAGCATGATTAGGCATTCTGGTGTTTCTTCGTCTTCTCAAGTATCACAAAGGTTTCATTCTGTTGATAATTCTCTGAACTTGAGGTCAGCACCACCAATAGATAATGCGGTTGCTCAAAGCCAGCCACCAGTAATCCGTGTTCCTGCTTTGCCTAGGAATAGACAATCAATTAGATGGAGTGGTGGTTCAAGCTCCAGCAACATCCACTCATTAAACTCAATTGTAAGCGCAGACAGGGATCAGGAGGATGTGAGATCAAGAAGAATGTCTAGAAATATTTTCGAACACCCCATCTTTGTACCTGCAACTGACTTAAGAAATTTAGTTCAGAATCCAACAGTTAGAGTTTCAAGTGCAAGTAGTGAAAACTTAAGTATTCCGGGAAATGTTGCGTCTTTGTCACGAACTGGATCAACTCAAGCTGCCAATCCCTCATCTGCCCCAACTTGGGTTTCACGTCCTAATCCTCCACCGCATCCACGGAGGTTATCTGAATATGTCCGCCGGTCCTTGTTTTCTGCTGGTTCAGATGCTATTGGAAGTCCAAACAATAATTATTCGTCCTTGCGCTCTGGTCTTTCTACATCTGATCCAAGGGCTTTATTATCTGGGAGTGGGGCAAACCCAAGATCATCTTCATGGTTGGAGAGGCAAGGAGATAGTGAATTTGGAATTCCTTATTCACTACGCACTTTGGCTGTTGCAAGTGAAGGAAGTAGTAGACTTGTATCTGAGCTCCGCAATGTTTTGGGCCTTATGCGTAGAGGTGGGAATGGGCGATTTGAGGAGTTGTTGGCTCTGGAAGAGCGCATTGGAAATGTGAGTACTGGATTGAGTGAGGAAACCGTATTGAAACTCTTGAAACAGAGAAAGCACTCGATTGAAAGAGGGTATCAGACTGATGCAGAACCCTGTTGTGTTTGTCAGGAGGATTATGGTGATGGGGATGATATTGGAACGCTTGATTGTGGCCATGATTTCCATAGCAGCTGTATCAAAGAGTGGCTAATGCAAAAGAATCTGTGTCCCATTTGTAAGACAGCGGGCTTGACAGCATGA 2025 0.4341 MQGKRGTVGSMPETLEFDCGSASGNSTADQPICWNNVNPAEHQIPDYILFPGDMNSSYENSIINHEWKNLSGWSLGEPCPSNTPNEINNNEQERELGGSSVITAGALAGPRLEERHLQQINALSLDNVNTGPMYTHSPNSRLMPQNLNLNAGLVDSGSHNSQHLELPNLNKSSGSVNECVPPHVGSGSFLLPSGNNGFLVGDTDGRPGCSPDTRRVSCKRKAVEGNNGPSSDAGSSSYSQRTDGSAWHTIPTQDNAESSSSRSIFSEQVNARLGLGMGDETSENVPDSNIARSSESFPRNFRLRLNPSNPQNSAPPTAFSTESMIRHSGVSSSSQVSQRFHSVDNSLNLRSAPPIDNAVAQSQPPVIRVPALPRNRQSIRWSGGSSSSNIHSLNSIVSADRDQEDVRSRRMSRNIFEHPIFVPATDLRNLVQNPTVRVSSASSENLSIPGNVASLSRTGSTQAANPSSAPTWVSRPNPPPHPRRLSEYVRRSLFSAGSDAIGSPNNNYSSLRSGLSTSDPRALLSGSGANPRSSSWLERQGDSEFGIPYSLRTLAVASEGSSRLVSELRNVLGLMRRGGNGRFEELLALEERIGNVSTGLSEETVLKLLKQRKHSIERGYQTDAEPCCVCQEDYGDGDDIGTLDCGHDFHSSCIKEWLMQKNLCPICKTAGLTA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2462 674 MobiDBLite consensus disorder prediction 510 538 - -
Aed7g2462 674 MobiDBLite consensus disorder prediction 202 263 - -
Aed7g2462 674 MobiDBLite consensus disorder prediction 379 403 - -
Aed7g2462 674 MobiDBLite consensus disorder prediction 438 471 - -
Aed7g2462 674 Pfam Ring finger domain 627 668 IPR001841 -
Aed7g2462 674 MobiDBLite consensus disorder prediction 228 263 - -
Aed7g2462 674 CDD RING-H2_TTC3 626 668 - -
Aed7g2462 674 SMART ring_2 627 667 IPR001841 -
Aed7g2462 674 MobiDBLite consensus disorder prediction 276 295 - -
Aed7g2462 674 MobiDBLite consensus disorder prediction 379 397 - -
Aed7g2462 674 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE ISOFORM X1 580 673 - -
Aed7g2462 674 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE ISOFORM X1 1 571 - -
Aed7g2462 674 MobiDBLite consensus disorder prediction 438 485 - -
Aed7g2462 674 ProSiteProfiles Zinc finger RING-type profile. 627 668 IPR001841 -
Aed7g2462 674 SUPERFAMILY RING/U-box 617 670 - -
Aed7g2462 674 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 580 673 IPR045191 GO:0061630
Aed7g2462 674 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 571 IPR045191 GO:0061630
Aed7g2462 674 MobiDBLite consensus disorder prediction 150 169 - -
Aed7g2462 674 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 590 671 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2462 Aed-Chr7 26383287 26388696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2462 1 672 C3H Transcription Factor Family AT2G15530 29.920 3.47e-52 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0330 6 2874322 2880607 Aed7g2462 7 26383287 26388696 PCT