Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2444 ATGTCTGTTCGAAGTGAACATCAATCGATTCCTCTTTCGGTGCTGCTGAAGCGCGAGTTGGCGAATGAGAAGATTGAGAAGCCCGAAGTTGTTATTTTGCACGGCCAAGCTAATGAGAATAAGAAAGGAGAGGATTTAACCCTATTCAAGACGGAATGCCAAAGGGTTCTGGGAGATGGGGTTTCTACCTATTCTGTTTTCGGGCTCTTTGATGGACACAATGGAACTGCTGCCGCTATTTATGCCAAGGAGAATCTACTAAACAATGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGAGTGGGTAGCAGCGTTGCCTAGGGCTTTGGTTTCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGCAAAAACATCGGGAACAACTGTAACCTTTATGATTATAGAAGGATGTGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGGATTTATTACTTGTCAGCAGACCATAGACTAGAGAGCAATGAAGAGGAGAGGGTCCGCATCACTTCTAGTGGAGGTGAGGTTGGTCGTCTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGTCTATGTCTCTCACGATCCATTGGTGATGTGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCTACTGCTGGAGGCAGGATTATTATCAGTAGTGATGGTGTCTGGGATGCTATAAGTGCAGAAATGGCACTAGATTGCTGTCGTGGCATGTCACCTGAGGCTGCTGCAACCCATATTGTCAAACCAGATGTGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTTTGCAACATGTTCAAGTTGTTTATCTGTGCAGTGTGTCAGGTAGAGATTAAACCAGGGGAGGGTATTTCCATACACGAGGGTGTGGGTGTGCCTAACCCAAGAAGATTGCGTCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGCGAACATCAGATAGAGTTAGTAGCGGGAGTGACTAA 1113 0.4501 MSVRSEHQSIPLSVLLKRELANEKIEKPEVVILHGQANENKKGEDLTLFKTECQRVLGDGVSTYSVFGLFDGHNGTAAAIYAKENLLNNVLSAIPSDLNRDEWVAALPRALVSGFVKTDKDFQEKAKTSGTTVTFMIIEGCVVTVASVGDSRCILEPSEGGIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDVDVGEFIVPVPHVKQVKLSTAGGRIIISSDGVWDAISAEMALDCCRGMSPEAAATHIVKPDVVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGVGVPNPRRLRPWDGPFLCSSCQEKKEAMEGKRTSDRVSSGSD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2444 370 CDD PP2Cc 40 276 IPR001932 -
Aed7g2444 370 SMART PP2C_4 23 292 IPR001932 -
Aed7g2444 370 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 279 - -
Aed7g2444 370 PANTHER ALPHABET, ISOFORM E-RELATED 277 366 - -
Aed7g2444 370 Pfam Protein phosphatase 2C 59 276 IPR001932 -
Aed7g2444 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 279 - -
Aed7g2444 370 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 277 366 - -
Aed7g2444 370 MobiDBLite consensus disorder prediction 351 370 - -
Aed7g2444 370 Gene3D - 30 296 IPR036457 -
Aed7g2444 370 SUPERFAMILY PP2C-like 39 276 IPR036457 -
Aed7g2444 370 ProSiteProfiles PPM-type phosphatase domain profile. 29 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2444 Aed-Chr7 26255012 26259694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2444 1 370 PP2C-type Phosphatase Gene Family AT1G47380 66.204 0.0 571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0197 11 1571727 1576596 Aed7g2444 7 26255012 26259694 PCT