Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1535 ATGGTGCCACCACCAGAGAATATGCCAGCACCGAAAGAGCAAACCACCGCCACCGTTGCCACCGGCGCAACGACGATGAGGCCAGCGGCGGCGACGGAGCAAGCCGCGAAGTGCCCGCGATGCGACTCGGCGAACACCAAGTTCTGCTACTACAACAACTACAGCCTGACCCAGCCGAGGCACTTCTGCAAGACATGCAGAAGGTACTGGACAAACGGTGGAGCCTTGCGCAACGTCCCAATCGGCGGTGGCTGCAGGAAGAACAAAAGGGTCAAACCCTCTTCCTCTTCATCTTCCTCATCATCCTCGTCTTCGAGACTCTCCACCGAATTCAGCCTCAACGGCCTCCGCATCCCCCATTCGGTCGAATTCAACCTCGCCGCGCTGCCCTTCCCCTCAAGGCTCAACGCAAACCACCACAACCACATTCCACCGCCGCAGCCTCCGCCGCACACTGGCGGCATGTTCAACCAGTTCTCGTCCTCCTTCGGGGACGTCAACTCTAATGCTTTGTCCGGCTTTCATCTCAACCCGCCTGCCGTTGTGTCGAACTCCTTGATGGGCGGCCTTGTTCCCGCCAGCCCCGCGGATTTCTGGGCGCTGGGCGGCGGCCGGTCCCAAAGCTCGGCGCTACTGTCTGATCCATTGACCAGCGCAATGCAGTCGACTATGCAGCAATCCATGCACCATTCTGTGAATCTTCATGGCAGCAGCCTCGCTTCCTCAATTGAGTCACTCAGCAGCATCAACCAGGACCTGCACCTGAAGATGCAGCAGCAGCGTTTCGCCACAATGATTTTCGGTGGTGGCGGCGACGACAACAACAACCACAGCGGCGGCGGCGGCGTTTTGCTCAACGGGTTCGTGAACCACCCGGATATGTTTCAGAGCCTCGAGATTTCGAAGCCAGCTGGCGGTTCCGTAACAGAAGGCCCAAAGAGAGCTGAGTCTCAGGTTCCTTCAGTTACTGATCAATGCAATATTGCACAAAAGGGGTGA 999 0.5806 MVPPPENMPAPKEQTTATVATGATTMRPAAATEQAAKCPRCDSANTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKRVKPSSSSSSSSSSSSRLSTEFSLNGLRIPHSVEFNLAALPFPSRLNANHHNHIPPPQPPPHTGGMFNQFSSSFGDVNSNALSGFHLNPPAVVSNSLMGGLVPASPADFWALGGGRSQSSALLSDPLTSAMQSTMQQSMHHSVNLHGSSLASSIESLSSINQDLHLKMQQQRFATMIFGGGGDDNNNHSGGGGVLLNGFVNHPDMFQSLEISKPAGGSVTEGPKRAESQVPSVTDQCNIAQKG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1535 332 MobiDBLite consensus disorder prediction 302 332 - -
Aed7g1535 332 PANTHER DOF ZINC FINGER PROTEIN DOF5.7 21 270 - -
Aed7g1535 332 MobiDBLite consensus disorder prediction 314 332 - -
Aed7g1535 332 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 270 IPR045174 GO:0003700|GO:0006355
Aed7g1535 332 MobiDBLite consensus disorder prediction 81 106 - -
Aed7g1535 332 MobiDBLite consensus disorder prediction 90 106 - -
Aed7g1535 332 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Aed7g1535 332 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Aed7g1535 332 MobiDBLite consensus disorder prediction 1 22 - -
Aed7g1535 332 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1535 Aed-Chr7 17837274 17839360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1535 2 96 C2C2-Dof Transcription Factor Family AT5G65590 61.458 1.15e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed7g1535 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1535 - - gmx:102663483 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0221 6 1944087 1945142 Aed7g1535 7 17837274 17839360 PCT