Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0948 ATGCCGTCGTCGAACTCTGGGGAGAGCCGCAGAGTGAGCAAGCCGCAGAGCTCGGGCGGAGCAGCGGCAGCGCCTCCGCCGGAGCAAGAGAATCTGCCTTGCCCGCGGTGTGACTCCACCAACACCAAGTTCTGCTACTACAACAACTACAACTACTCCCAGCCGCGCCACTTCTGCAAGGCCTGCCGCCGGTACTGGACCCACGGCGGCACCCTCCGCGACATCCCGGTCGGCGGCGGCAGCCGCAAGAACGCCAAGCGCTCCCGCACCCACCACGCTGCCACCTCGTCATCCTCCTCCTCCTGCACCATGACGTCAGCGCAGGACCACCACCACCACCACCACAACGCGCACGCTCTTCCCGCCTCCGCGTTGGCCCCCGTCGCCGCCGCCACGCACTTCGGACTCGACGGCGGCGACGTCAAACAGAATGGCATTGGTAGCTTCACCTCGTTGCTGAACAACAGCCAGGGCTCCGGGTTTCTGGCACTGGGCGGGTTTGGGCTTGGGCTTGGGCACACCTTCGAGGACATGGGCTTCGGCATTGGGAGGTCGGGCTGGCCCTTCCCCGGAATGATGGACGCCGGCAACATTGGCGGCGCCGTTGCTTCCTCTGGAATGAACACGTGGCAGTTAGAGAGTGGCGATGGAGGGTTCGTCAGCGGAGATTGCTTCTCATGGCCCGGGCTTGCCATTTCAACACCGGGAAATGGATCTCTTGGTTTGCGGGTTGTCTTGTTTTTTCTACGCCAGGACTCTGCTAAACAACTTGCACCTTCAATTCTAGTTTTGTCTTGTGCCTGGACTAGTAGCATGGGGAAGGGAAAAATTAAATAA 837 0.6129 MPSSNSGESRRVSKPQSSGGAAAAPPPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHAATSSSSSSCTMTSAQDHHHHHHNAHALPASALAPVAAATHFGLDGGDVKQNGIGSFTSLLNNSQGSGFLALGGFGLGLGHTFEDMGFGIGRSGWPFPGMMDAGNIGGAVASSGMNTWQLESGDGGFVSGDCFSWPGLAISTPGNGSLGLRVVLFFLRQDSAKQLAPSILVLSCAWTSSMGKGKIK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0948 278 MobiDBLite consensus disorder prediction 73 118 - -
Aed7g0948 278 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Aed7g0948 278 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 237 - -
Aed7g0948 278 Pfam Dof domain, zinc finger 30 86 IPR003851 GO:0003677|GO:0006355
Aed7g0948 278 MobiDBLite consensus disorder prediction 1 16 - -
Aed7g0948 278 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Aed7g0948 278 MobiDBLite consensus disorder prediction 91 106 - -
Aed7g0948 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 237 IPR045174 GO:0003700|GO:0006355
Aed7g0948 278 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0948 Aed-Chr7 7151857 7153242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0948 1 237 C2C2-Dof Transcription Factor Family AT3G50410 48.627 8.57e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed7g0948 zf-Dof 9.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0948 - - gmx:778099 346.665