Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0488 ATGAAAATGATGAAGCTTGTTCTTCTTTTGTTCTGCTTTGCCTCTGCTCTGACCCTTTCAGTCTCGGAGTCCAAATCTGGTTCTGTGCAACCTCATGCACCTGAATTTCTCTCTGCTGGATATATTCAGATGAAGACTCAAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGTTCATCGCCCAAGTACACAACGGATAAGATCGGTATCATGTTTGGGGATGCTTATGGCAACAAGGTATATGAACCAAGACTGGATGATCCAGTTTCAAGGACATTTGAGCAGTGTTCATCAGATACATTTCAGATAGATGGTGCATGTGCATCTCCAATTTGCTTTGCGTACCTATATAGAGCTGGGGCAGAGGAAGGTTGGGAGCCAGAGAATGTGAAAATCTATGGCTACGACTCAGAGCCAATTACTTTCGATTTCAACACCTCCATCCCCAATGGCACGTGGTATGGGTATAATTTGTGTGAGACTCCAACTCCAACTCCTCCTTCTCCTCCTCATCCTTCTTCTTCATACCAACTATCCCCTCAGAAATGGCTCGTGAGTTTGGTGCTAGGCTTTGTTCTTAGTTTTTGGATGTAA 600 0.4383 MKMMKLVLLLFCFASALTLSVSESKSGSVQPHAPEFLSAGYIQMKTQANCSYLVVISTSCSSPKYTTDKIGIMFGDAYGNKVYEPRLDDPVSRTFEQCSSDTFQIDGACASPICFAYLYRAGAEEGWEPENVKIYGYDSEPITFDFNTSIPNGTWYGYNLCETPTPTPPSPPHPSSSYQLSPQKWLVSLVLGFVLSFWM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0488 199 CDD PLAT 50 161 - -
Aed7g0488 199 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
Aed7g0488 199 PANTHER - 4 199 - -
Aed7g0488 199 PANTHER EMBRYO-SPECIFIC PROTEIN 4 199 - -
Aed7g0488 199 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 47 158 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0488 Aed-Chr7 3492160 3494054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0488 - - gmx:100305526 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0488 7 3492160 3494054 Aed7g0488 7 3492160 3494054 ECH
Aed1g2159 1 18017406 18019518 Aed7g0488 7 3492160 3494054 PCT