Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0262 ATGGCCTTATGGAAAGAAGAAGCAAAGAAGCAACTATGGCTGGCAGCACCAATGGTGTTTGTTAGTGTGTTTCAGTATAGTTTACAAGTCATATCTCTCATGTTTGTAGGCCATTTAGATGAGTTGCTTCTGGCTGGTGCTTCTTTGGCTACTTCATTTGTCAATGCTACTGGTTTCAATGTCTTGATGGGCATGTCAAGCGCACTTGACACATTTTGTGGTCAAGCATATGGAGCAAAGCAATTTCACATGCTTGGTGTACACACACAAGGAGCCATGTTGGTTCTCACCCTTGTTACCATACCCCTTTCCATTATTTGGTTATTCTTAGAGCCTATTCTAATTGCTCTTCATCAAGACAAAGAAATTGCAGCACAAGCTCAACTATATGCTAGATACTTGATCCCAAGCCTTTCAGCCAATGGCCTTCTTCGGTGCATTACTAAGTTCCTACAAACCCAAAACATAGTCTTTCCTATGGTGCTTGCCACTGGTCTTACTAGTTTACTACACTTCTTTCTCTGTTGGGTTTTGGTTCTTAAAATTGGGCTGGGTATCAAAGGATCTGCCATTGCTATCTGCATTTCAAGTTGGTTTAATACCATTTTGCTTGCACTTTATATTAAGTTCTCCCCTTTATGCAAAACAACTTGGACTGGTTTCTCAAAGGAGTCATTGCATAACATCCCTAAATTTCTCAGACTTGCTTTTCCTTCAACACTCATGGTGTGCTTAGAATCATGGACGTTTGAAATAATGGTGATCCTGTCTGGTGCTCTTCCTAATGCGAAATTGCAAACTTCAGTACTTTCTATATGCCTTAACACATCTGGTATATTTTGGATGATACCATTTGGAATTAGTGCTGCTGGAAGTACAAGGATCTCAAATGAATTAGGGGCTGGTAGTCCAAAAGCTGCATATTTAGCAGTTAAAGTGACCATGTTCCTGGCCTCTGCAGTGGGGATTTTAGAATTTGCTACCCTTATGTTATTATGGAGAGTTTGGGGGCGTGCTTTTACCAATGTACATGAAGTGCTCAACCATGTGACTACCATGATGCCAATTCTTGCAAGCTCTACCTTTATAGATTCAGTTCAAACAGCATTCCAAGGTGTTGCTAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGGATCTTATTATTTTTTGGGAATTCCTTTTTCTGTTGTATCAGCTTTTGTCTTCCACATGAAAGGACAGGGGCTATTTTTAGGGATTGTTCTAGCACTTATTGTGCAAGTGTTGTGTTTCCTTCTAGTCATCCTACGCGCCAATTGGGAGAAAGAAGCAAAAAAGGCAGCAATAAGAGTAGGAGGTAGTGGAGTCCAACTTCAGGACCTTCAGAGTGACCAAAATGCTAATACTGCTTGA 1404 0.4067 MALWKEEAKKQLWLAAPMVFVSVFQYSLQVISLMFVGHLDELLLAGASLATSFVNATGFNVLMGMSSALDTFCGQAYGAKQFHMLGVHTQGAMLVLTLVTIPLSIIWLFLEPILIALHQDKEIAAQAQLYARYLIPSLSANGLLRCITKFLQTQNIVFPMVLATGLTSLLHFFLCWVLVLKIGLGIKGSAIAICISSWFNTILLALYIKFSPLCKTTWTGFSKESLHNIPKFLRLAFPSTLMVCLESWTFEIMVILSGALPNAKLQTSVLSICLNTSGIFWMIPFGISAAGSTRISNELGAGSPKAAYLAVKVTMFLASAVGILEFATLMLLWRVWGRAFTNVHEVLNHVTTMMPILASSTFIDSVQTAFQGVARGCGWQKLGAYINLGSYYFLGIPFSVVSAFVFHMKGQGLFLGIVLALIVQVLCFLLVILRANWEKEAKKAAIRVGGSGVQLQDLQSDQNANTA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0262 467 CDD MATE_eukaryotic 7 443 IPR045069 GO:0042910|GO:1990961
Aed7g0262 467 Pfam MatE 17 177 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed7g0262 467 Pfam MatE 238 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed7g0262 467 TIGRFAM matE: MATE efflux family protein 17 413 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed7g0262 467 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 448 - -
Aed7g0262 467 PANTHER PROTEIN DETOXIFICATION 5 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0262 Aed-Chr7 1847376 1851202 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0092 3 715612 718243 Aed7g0262 7 1847376 1851202 ECH
Aed3g1149 3 9506280 9513329 Aed7g0262 7 1847376 1851202 ECH
Aed1g1916 1 16420272 16425569 Aed7g0262 7 1847376 1851202 ECH
Aed7g0262 7 1847376 1851202 Aed7g0262 7 1847376 1851202 ECH
Aed7g0262 7 1847376 1851202 Aed5g2624 5 26927103 26929590 PCT