Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0260 ATGAAAGGAGTTTCAAGGCAGGAAGTGGTGGAAGAAATGAAGAAGCAAGTATGGTTAGCTGGGCCTCTCTTCACTATTGGTGTGCTTCAGTACAGTTCGCAGGTTGTATCTGTTATATTTGTTGGCCATCTTGGAGAATTGCCTCTTTCTGGTGCTTCACTCGCCACTTCCTTTGCATCTGTCACTGGTTTCAATTTGTTGATGGGTATGGCTAGTGCATTGGATACATTGTGTGGCCAGTCATTTGGAGCAGGGCAGCACCATATGCTAGGCATACACATGCAAAGAGCTACCTTTGTTCTTTCATTTGTAAATATCTTTCTAGCAATCATGTTGGTATTCACCAAACACATTCTAGTTGCCATGCACCAGCAAGTTGCCATAGCTGAGGAGGCCGGGGTTTATGCCCTTTACATGATTCCAAGCCTTTTTGCTTATGGCATCTTTCAATGCCTTCTCAAGTTTCTACAAACTCAAAACATTGTCTTCCCCATGGTGCTGAGCTCTGCAATGGTGGCTTTACTTCACATCCCTTTATGTTGGGTGTTAACAATTAAATCAGGACTTGGAAGTAAGGGAGCTGCCATAGCAAATTCAGTATCATACTGGTTAAATGTGCTGCTGATAGGACTTTATGTGAAGTTTTCTTCCTCATGTGCAAAATCATGGACCGGCTTCTCAAAGAAGGCCCTGCAAAATATCCCAGAATTCCTTAAAATTTCTATTCCTTCAGCTTGTATGCTTTGCTTAAAGGCTTGGACATTTGAACTAATGGTTCTGCTATCTGGCCTTCTTCCAAATCCACAGTTAGAAACTTCCGTGTTATCCATATGTCTTAACACATTTGTAATTGCCTGGATGATTCCCTTTGGATTAAGCTGTGCTGTCAGCACAAGGGTCTCAAATGAACTAGGGGCTGGTCATCCACAAGCTGCTAGTCTTGCAGTTCGAGTTGGTCTCTTCCTGGTCCTAGCTGAGGGTATTATGATGGTATTAGTCATGATCCTGCTAAGAAAAATATGGGGGAATCTTTACAGCAGTGAAACACAAGTTACAAAATATGTAGCAGCCATTATGCCAATTCTTGCTATATGCAGCTTCCTAGATGGGATTCAAAGTGTTCTTTCAGGCATTGCAAGAGGTTCTGGCTGGCAGAAGATCGGTGCAACTGTGAATCTTGGATCATTTTATTTTGTGGGAGTACCTTCTGCAGTGGTGTTAGCTTTTGTTTTGCATATGAAAGGAAAGGCAAATAAGGCAGCATTGAGAGTCAAAGATACCAAAACCCCTCAGGAGTTGCCCCAGGGAGATCCACTTACCATCTCAGAAGTGATTTGA 1338 0.4268 MKGVSRQEVVEEMKKQVWLAGPLFTIGVLQYSSQVVSVIFVGHLGELPLSGASLATSFASVTGFNLLMGMASALDTLCGQSFGAGQHHMLGIHMQRATFVLSFVNIFLAIMLVFTKHILVAMHQQVAIAEEAGVYALYMIPSLFAYGIFQCLLKFLQTQNIVFPMVLSSAMVALLHIPLCWVLTIKSGLGSKGAAIANSVSYWLNVLLIGLYVKFSSSCAKSWTGFSKKALQNIPEFLKISIPSACMLCLKAWTFELMVLLSGLLPNPQLETSVLSICLNTFVIAWMIPFGLSCAVSTRVSNELGAGHPQAASLAVRVGLFLVLAEGIMMVLVMILLRKIWGNLYSSETQVTKYVAAIMPILAICSFLDGIQSVLSGIARGSGWQKIGATVNLGSFYFVGVPSAVVLAFVLHMKGKANKAALRVKDTKTPQELPQGDPLTISEVI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0260 445 Pfam MatE 243 405 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed7g0260 445 Pfam MatE 22 182 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed7g0260 445 PANTHER PROTEIN DETOXIFICATION 5 417 - -
Aed7g0260 445 CDD MATE_eukaryotic 12 416 IPR045069 GO:0042910|GO:1990961
Aed7g0260 445 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 417 - -
Aed7g0260 445 TIGRFAM matE: MATE efflux family protein 24 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0260 Aed-Chr7 1829685 1832149 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0260 7 1829685 1832149 Aed5g2624 5 26927103 26929590 ECH
Aed1g1915 1 16415634 16419547 Aed7g0260 7 1829685 1832149 ECH
Aed7g0260 7 1829685 1832149 Aed7g0260 7 1829685 1832149 ECH
Aed5g2624 5 26927103 26929590 Aed7g0260 7 1829685 1832149 PCT