Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0246 ATGGATCCTCCACCCCTCTCTGCTGCCACCATCACCACTCAAAAAAACCATCCTGACTCGTTAGAATCCTTTTCTCCACGTTCCCGGAACTCGGAAACATGGAATGATGAGGCTCTACCGGCAGTTCCGGGCGCCAAGCTCCGCCTCATGTGCAGCTATGGTGGCCACATCATGCCACGCCCTCACGACAAGTCTCTCTGCTACGTCGGCGGTGACACCAGGATTATCGTGGTGGACCGCCACTCGTCGTTGAAAGATCTATGTGCACGGCTTTCCCGAACCATCCTCAATGGAAGACCCTTCACACTCAAGTACCAGCTTCCAAGTGAAGATCTTGATAGCCTCATCACTGTCACCACTGATGAAGACCTTGACAACATGGTGGAAGAGTATGATCGTATAACGGCAAAAGGTTCGGCTTCTTCGCGGCTCAGAGTGTTCCTGTTCTTCACCAAACCAGAGGCCACGGTTTCAATGGGGTCACTCCTTGATGATGCCAAGTCAGAGACATGGCTTCAGCAAGAGAACAAGGTTGGTTTGGCGGTGGAGGAGCAGTTCGCTCAGATGACAATTGCAAGTGGGGTGAAGCCAGATGATGGATTGGTGAGTGTTATTTCTTCTGCAGTGGCTGTGACTCCAATTCCTGCAGCTGTGACCATGGTTACGACTAGTGATACTGTGATGCATAGAGTTGTTTCTGAGGATGAGAGATCTGATCCCGGGTTTCGGAAGCCACCTTTACCGTTGCAGCTTATGCAGCCAAGGACTAGTGGTGGCTTAAGTTTGCCTTCTCCTGATTCAGTTACAAGTGATAGTAGTATTGCATCTGCCAATTCATTCTCCAAGACTGTTTACTATCAAGATCAAGTCCAAGCTGCACTACTAGACAACAACAAATTTATTGCTATGTCAAATGCCAAGAGTGAAATATCAGATCAGATGATTCAGGTCCACGGACAACAAGTTCAAGATTCTTCTGGCTACACATTACCCCCACAATTGGATCAAAACAAGCAATTCCAGCAGCAGAAGGCATTGGTCCATGCCAGCACTCACTACATCCACCACCATCACCCTGGAGCCACAGGTCCAGTTCCAGTTTCATCATACTACCCAGTTTATGCACCACAACCACAACCACAACTTCACCCTCCAATTGGTCAACAACAGTACCCAGTTTATGTGATGCCTGTTGGACCTACACAACCCTACAACATGGCATTGCCACAGAGTGTTGTTACCTCAGCAGCAGCATACAAGGATGGTACTCCACCAATTTACCCCACAAAGTCAGTTAGCCCTACTATACCTGAGATGAGTCAAAGTGTTTTCAAGGCTTCTCCAGTGGCATCAAATCCTGCATATGCTCCAATACCTACTAACCAATTTCAGCCACAGTATGTGGGTTTGCATCAGTTCCATCATCCACCACAGTCCATTGCTGTGGCTCCCTCTAGTAGTACTACTACTACTACTAATTATGGTTATGATCAATATGGTGGCCATGTGCAAGACCAAGCTTACTACACTCAACAACAACAAACCACTACTGCTCCATTGCTTCCTCAGTACCAATCCATGACCCCAGCTGCTGCTGCTGCAGCACTATCAGATGCTTCAAAACAGTTTCCTCCAGACAACAACATTCAGCAGCCAAATAGAGCATCACAACCAGTATGA 1680 0.478 MDPPPLSAATITTQKNHPDSLESFSPRSRNSETWNDEALPAVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIIVVDRHSSLKDLCARLSRTILNGRPFTLKYQLPSEDLDSLITVTTDEDLDNMVEEYDRITAKGSASSRLRVFLFFTKPEATVSMGSLLDDAKSETWLQQENKVGLAVEEQFAQMTIASGVKPDDGLVSVISSAVAVTPIPAAVTMVTTSDTVMHRVVSEDERSDPGFRKPPLPLQLMQPRTSGGLSLPSPDSVTSDSSIASANSFSKTVYYQDQVQAALLDNNKFIAMSNAKSEISDQMIQVHGQQVQDSSGYTLPPQLDQNKQFQQQKALVHASTHYIHHHHPGATGPVPVSSYYPVYAPQPQPQLHPPIGQQQYPVYVMPVGPTQPYNMALPQSVVTSAAAYKDGTPPIYPTKSVSPTIPEMSQSVFKASPVASNPAYAPIPTNQFQPQYVGLHQFHHPPQSIAVAPSSSTTTTTNYGYDQYGGHVQDQAYYTQQQQTTTAPLLPQYQSMTPAAAAAALSDASKQFPPDNNIQQPNRASQPV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0246 559 MobiDBLite consensus disorder prediction 1 35 - -
Aed7g0246 559 PANTHER OS05G0427100 PROTEIN-RELATED 215 551 - -
Aed7g0246 559 MobiDBLite consensus disorder prediction 532 559 - -
Aed7g0246 559 MobiDBLite consensus disorder prediction 541 559 - -
Aed7g0246 559 MobiDBLite consensus disorder prediction 233 271 - -
Aed7g0246 559 SMART PB1_new 61 151 IPR000270 GO:0005515
Aed7g0246 559 Gene3D - 66 150 - -
Aed7g0246 559 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 215 551 - -
Aed7g0246 559 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 171 - -
Aed7g0246 559 CDD PB1_UP2 50 149 - -
Aed7g0246 559 PANTHER OS05G0427100 PROTEIN-RELATED 1 171 - -
Aed7g0246 559 ProSiteProfiles PB1 domain profile. 46 149 IPR000270 GO:0005515
Aed7g0246 559 MobiDBLite consensus disorder prediction 7 35 - -
Aed7g0246 559 SUPERFAMILY CAD & PB1 domains 62 159 - -
Aed7g0246 559 Pfam PB1 domain 62 149 IPR000270 GO:0005515
Aed7g0246 559 MobiDBLite consensus disorder prediction 254 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0246 Aed-Chr7 1729962 1732432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0246 45 169 MAP Kinase Kinase Kinase AT1G79570 41.600 3.98e-25 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0793 11 11793509 11796871 Aed7g0246 7 1729962 1732432 ECH
Aed1g1894 1 16216474 16219441 Aed7g0246 7 1729962 1732432 ECH
Aed7g0246 7 1729962 1732432 Aed7g0246 7 1729962 1732432 ECH