Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1582 ATGCACGAAATTAGAGACCCTGCAATTCGCCTCTTCGGTCAGAAGATCCCTTTCCCTGAAGAAGAGGGTGTTCAGGAAAGAGAACAAGAGATGGAAGAATATGAAGACAAGGATGCTGGAGTTGAAAATGTTATTGAGGAAGAGCTAGAAGCCGATCCTCCTCCAAATTCAGGCACATCCCCTGAGGCTATTGTGAACCCCAAAACACCCTCCATAGAAGAAGAAACAGCAAAATCAAATGGTGACAAATCAGAGAAGGAACAAGGTGATGCAGCTAACTCATCAGAAGAGAAAACCCTGAAGAAGCCAGATAAAGTGCTGCCATGCCCCCGCTGCAAAAGCATGGACACTAAATTCTGTTACTACAACAACTACAATGTGAATCAGCCACGTTATTTCTGCAAAGCTTGTCAAAGATACTGGACTGCAGGTGGCACCATGAGGAATGTTCCTGTGGGGGCAGGACGGCGAAAGAACAAGACCTCTACCTCCCATTATCGCCACATCACTATCTCTGAGGCCCTTCAAGCAGCTAGAATTGATGCTGCTCAAAATGGAACTCATCTTCAAACCTTGAAAGCCAATGGTAGAGTCCTCAGCTTTGGATTAGATGCACATGCACATGCACCACCTATTTGTGATTCCATGGCATCTGTCATGAATCTTGGAGAGAAAAAGGCTCTTAATAATGGCACAAGAAATGGATTTCATCATGGCTTTGAGGATCAAAGACTTCCTTGCAAAAGTGTGGAAAATGGTGATGACTCTTCAACTACTACATCTTCAATTACAGTTTCAAATTCCATAGGAGGAGAAAAGAGCAAAAGTGCCTTCCAACAACAGCCAGTGCCACAAAACCATGGTTTCCTTCCTCAACTTCCATGCATTCCTGGTGTTCCTTGGCCCTATGCATGGAATTCTGCAGTTTCTCCACCTAATTTGTGTCCTTCAGGATTTCCCCCCCTACCATTCTATCATGCTACATTTTGGAACTGTGGCATGCCAGCTGGGAATTGGAATGTTCCATGGCTTTCCTCACATTCATCTGCTTCAAACCTCAACAAGTCTCCAAGCTCCAGTCCCAACTCTCCAACTTTGGGGAAGCACTCACGGGACGGTGACATGATTCAGCAACAAGACTCATTGCACAAACAAGAAGAAGCTTCAAAGCCAAGAAACGGTTGTGTTCTGGTTCCCAAAACGTTGAGAATTGATGATCCAAATGAGGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATCAAGAATGAGTCAGTGAGTGGGGGAGGAGGTATGTTTAAGGCATTCCAATCAAAGAAAGATGAAAAGAATAATCATGTTGAAGCCTCTCCAGCATTGATGGCTAACCCTGCAGCTTTATCTAGATCCCTCAATTTTCATGAAAACTCATGA 1413 0.443 MHEIRDPAIRLFGQKIPFPEEEGVQEREQEMEEYEDKDAGVENVIEEELEADPPPNSGTSPEAIVNPKTPSIEEETAKSNGDKSEKEQGDAANSSEEKTLKKPDKVLPCPRCKSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKTSTSHYRHITISEALQAARIDAAQNGTHLQTLKANGRVLSFGLDAHAHAPPICDSMASVMNLGEKKALNNGTRNGFHHGFEDQRLPCKSVENGDDSSTTTSSITVSNSIGGEKSKSAFQQQPVPQNHGFLPQLPCIPGVPWPYAWNSAVSPPNLCPSGFPPLPFYHATFWNCGMPAGNWNVPWLSSHSSASNLNKSPSSSPNSPTLGKHSRDGDMIQQQDSLHKQEEASKPRNGCVLVPKTLRIDDPNEAAKSSIWATLGIKNESVSGGGGMFKAFQSKKDEKNNHVEASPALMANPAALSRSLNFHENS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1582 470 MobiDBLite consensus disorder prediction 250 284 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 25 49 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 1 106 - -
Aed6g1582 470 PANTHER CYCLIC DOF FACTOR 2 1 469 IPR045174 GO:0003700|GO:0006355
Aed6g1582 470 MobiDBLite consensus disorder prediction 432 454 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 347 394 - -
Aed6g1582 470 Pfam Dof domain, zinc finger 104 161 IPR003851 GO:0003677|GO:0006355
Aed6g1582 470 PANTHER CYCLIC DOF FACTOR 1 1 469 - -
Aed6g1582 470 Coils Coil 24 44 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 75 106 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 246 284 - -
Aed6g1582 470 MobiDBLite consensus disorder prediction 347 367 - -
Aed6g1582 470 ProSiteProfiles Zinc finger Dof-type profile. 107 161 IPR003851 GO:0003677|GO:0006355
Aed6g1582 470 MobiDBLite consensus disorder prediction 373 390 - -
Aed6g1582 470 ProSitePatterns Zinc finger Dof-type signature. 109 145 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1582 Aed-Chr6 19849705 19853408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1582 1 468 C2C2-Dof Transcription Factor Family AT3G47500 50.628 3.22e-140 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed6g1582 zf-Dof 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1582 - - gmx:778113 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1055 10 9360934 9364906 Aed6g1582 6 19849705 19853408 ECH
Aed3g0382 3 2697817 2701715 Aed6g1582 6 19849705 19853408 ECH
Aed11g0371 11 3143865 3147102 Aed6g1582 6 19849705 19853408 ECH
Aed6g1582 6 19849705 19853408 Aed6g1582 6 19849705 19853408 ECH
Aed11g0371 11 3143865 3147102 Aed6g1582 6 19849705 19853408 PCT