LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g0380	ATGAAGAAGAAGAACACAGTCACAGACATCATCATGAGTAATCCTTATTATTCCTCTGCAACTCCTCAATGGTCATCAACACCTCCAATGGATCCCAAAATTTGGAGCAAATTGCCACCTGAAATCCTCGAACACGTGCTCTCTTTTCTTCCTCTGAAAACCTTCTTGAACCTAAGATCCACTTGCAAAGGTTTCTGGCCTCTCATATTCTCTCCTTCTTTCATTTCCAAACACTCTTCTCCCACTTCTTCTTCTTCACCTTCACCCTTCTCTTCATTTCTCTTACTCTCACACCCTCAGTTCCATCGCCACTACCCTCTCTACGATTGCACACTCGGCACGTGGCGCAATCTCTCTCTCTCACTCTCTGATTCATTCCACTCTTTTCCTTCATTCACCACTCTTGTCTCCTCTGGTGGCCTCTTTTGCCTATCTGATTCCACTTCATGTTCCTTACTCGTGTGCAACCTTTTAGCCAAGTCCTCCAGAAAGATCCAATACCCAAGTTTCTCTCTTCACTTGGAGCATCTCACTTTTGTCACCACCTCAACTGGTTACACCATTTTTGTTCTGTTTTCCGAGGTTTCAGCTTCAACCTGTGCCTTTGTTTATGACTCAAAGGTTCAAACTTGGAAACGGTTTCACGGTTTTGGTCCAATTCTCGGTGACAATCACCACCAGCAAGGTGTTTTGTTCAATGGGGTTTTGTATTTTGCCACCCCAGAACCGTTTTCTGTGGTGATCTTTGATTTGAAGAGTGGAAGGTGGGAGAGGAACGTTGGCGAGTTACCGAGTCAACTCACTTTTGTTCGGTTGGTGAGTGATGGAGAGGGAAAACTGTACTTGGTTGGTGGGGTTGGGAACAATGGAATCTCAAGGAGTGTCAAATTGTGGGAATTGGGTGGTGATGGGAATTGGGTGGAAGTGCAGAGTTTGCCTGATCCTATGTGTAGAAAGTTTGTGTCAGTGTGTTACCATAACTATGAGCATGTTTATTGCTTTTGGCATGAGGGAATGATCTGCATTTGCTGCTACACTTGGCCAGAGATTTTGTATTACTTGGTTTCTAGAAGGACTTGGCATTGGCTTCCCAGGTGCCCCTCTTTGCCTCTCAAATGTAGCTGTGGTTTCAAGTGGTTCTCTTTTGTTCCAAAGCTCTATGCTTCTGTCTGA	1173	0.4476	MKKKNTVTDIIMSNPYYSSATPQWSSTPPMDPKIWSKLPPEILEHVLSFLPLKTFLNLRSTCKGFWPLIFSPSFISKHSSPTSSSSPSPFSSFLLLSHPQFHRHYPLYDCTLGTWRNLSLSLSDSFHSFPSFTTLVSSGGLFCLSDSTSCSLLVCNLLAKSSRKIQYPSFSLHLEHLTFVTTSTGYTIFVLFSEVSASTCAFVYDSKVQTWKRFHGFGPILGDNHHQQGVLFNGVLYFATPEPFSVVIFDLKSGRWERNVGELPSQLTFVRLVSDGEGKLYLVGGVGNNGISRSVKLWELGGDGNWVEVQSLPDPMCRKFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPLKCSCGFKWFSFVPKLYASV	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g0380	390	PANTHER	F-BOX/KELCH-REPEAT PLANT PROTEIN	34	388	-	-
	Aed6g0380	390	Gene3D	-	164	381	IPR015915	GO:0005515
	Aed6g0380	390	PANTHER	F-BOX/KELCH-REPEAT PROTEIN	34	388	-	-
	Aed6g0380	390	Gene3D	-	34	77	-	-
	Aed6g0380	390	Pfam	F-box domain	35	65	IPR001810	GO:0005515
	Aed6g0380	390	SMART	fbox_2	38	78	IPR001810	GO:0005515
	Aed6g0380	390	ProSiteProfiles	F-box domain profile.	32	78	IPR001810	GO:0005515
	Aed6g0380	390	SUPERFAMILY	F-box domain	27	105	IPR036047	GO:0005515
	Aed6g0380	390	SUPERFAMILY	Galactose oxidase, central domain	80	368	IPR011043	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g0380	Aed-Chr6	3298444	3299616	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed6g0380	6	3298444	3299616	Aed4g1579	4	20602107	20603186	PCT