Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0372 ATGGACCCATCTATCATGAAGCTTCTCGAAGATGATGAGGATGAAACAATGCATTCAGGAGTGGATGTGGAAGCCTTCCAGGCTGCCCTAAATAGAGATATAGAAGGAGCTGTGTCTACTTCCCAAGTTCGCATTGGAGCTTTGAGTGATTGCCCTGTAGCTGCTGAAAGAATTCCCCCAGATCCCATTGCTAGAATGTTGTCTCAAGGAAGCAATAATACCTCAAGTCAATCTTTATCACAGTGGCCTACTTCTAATCATGACAGCCAAACTGACTGTCAAAATCAAGAACCTAAAACTGCACAACAGCAAGAGCAACCTTCATCTGAGATGGAGCTGAAGCAACATGGATCTCTTGTGGAACAACTACAGCATGTTGCTTCTCAGGACATAAATAATCCTCATTTATCACAGAAACAATCTCAAGATGAATGTCACCAAGCACCAGCGGTACAGGTTTCCCTCCACAATTCTCAGGCTATTGGAATTCAGAATACTGGAAAAGATCCAGTCCTTAATAATGATGTAGTAAAGAATCATAACCCCAGCAGTGAATCTCAGTATGCGAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCTAGTAGTCAAGGAGCTCGTAGTAGTAAACAAGTACCATTTGGTCTGTTGCTACCCATCCTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTATTTGCTAAATTGAAGGTGGGTTTTCCAAACCAATCTTGCTATCAGAAAGATGAAATACAGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTATCAAAGGTGCAAATGCAATCACAGGCAAGGCCCAATCAAGCATCTTCTGGGCAGCAGCACCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCAAGGCAATTGAATGATCCACATGCCTTAGCACAGATGCATCAGAGAAGTATGAATGCTGCTGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACTATGGAGGGCAATGCTAGGAAATCTCAGGAATTGGATGTTAAAATAGAATCTCAAGGATTGCAACCAAGCCAATTAACATCTTCCAGTTCCAACATAGTTGGTCAAGAAACAGAAAGAACATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAACAACATCTACATTTCCCATCAGCATATGGAAATAGTGGTGGTAACTATCACCCTTTTTCTGGGACAACCAGTAGTTCCACTTCATCTATCAAACCGCAACTGCATGATTCACACATGAGTCAAATTCCGCATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAATGCAATTGGTATGCCAAAACTTGAACAGCAGAATCCTTTCAATGATCCCAAGAGACTGCCAGGTGGAGCTGTGTCTCCTGCTGTAAACAATACAGCATCTCACCAAACTTCAAATGCTTGGCAACCATCAACAAACAAAGAACAACATCTTGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTGGTGATTTGTCTAGTGAACAACAAAATAGACATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCGCAGCTTGAACAGGGTGGTGCTAGTCAAGGAACTTTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCATCCACAAGCATGCCACCTGCAACATCTACTGGCTTGCTGCCACATGGTTCTGTTTCCCCTTCTGTAATGACCCAACTAGACCCTAGTGTCTCGCTAAGCTCTCAGATCCCATCAAATGCTCCTGGAATTGTTGCAAGGACACCTCTTAAAAAGCCTGCTGTAACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTCCAAGTAAAAAACAAAAAACTTCTGGGGGATCTGTAGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAAGAAGAGCAGTTATTTTCAGGTCCCAAAGAGGATAGCCGAGTGTCAGAAGCTTCTCGAAAGGCTGCGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCTAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTATCACTGTGTGTGGAGGAAAGGATGCGTGATCTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAAGCATCGAACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAATGGGAGAAAAAACAGGCAGAAGCAGAGAAGATTCGGAAACTAAATGATGTTGACGGAAATTCTGGAGTTGATGGTGACAAGGAGAAGGATGATGGCCGTGGTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGGCAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGTTGAGCAAGCCAGGCAAAAACGTGATGGGGGGGTGGACGTGTCATCTGGTTCTCAACTAGCCAAAGATGTTAACCGCAAATCTTCATCAACATCTGGAAGAAGTACGAAGGATAACCAAGAAGGGGAGAAAAAAGGTTCAGCCACTTTTATAGCAAGTTCAGTGGCTAGAAAACTTGGGAAGAGTCATGCCATGGCACCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAACCCCAGATGTCTAAATCTCCACTCATACATCGCTTGTACGAGAAAATTCATTCTGATGCCCCAATTGAACAAGGTTGA 2898 0.4313 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIEGAVSTSQVRIGALSDCPVAAERIPPDPIARMLSQGSNNTSSQSLSQWPTSNHDSQTDCQNQEPKTAQQQEQPSSEMELKQHGSLVEQLQHVASQDINNPHLSQKQSQDECHQAPAVQVSLHNSQAIGIQNTGKDPVLNNDVVKNHNPSSESQYAKLQQMSNQQATVSEQPSSQGARSSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKVGFPNQSCYQKDEIQKDSFVRLMKGIVGDQMLRLALSKVQMQSQARPNQASSGQQHPVRMPTVSSGARQLNDPHALAQMHQRSMNAAVDQSRMSSSAGQTMEGNARKSQELDVKIESQGLQPSQLTSSSSNIVGQETERTSVHIQGLNKQQQQHLHFPSAYGNSGGNYHPFSGTTSSSTSSIKPQLHDSHMSQIPHQSIGSNHLGGSTHGLNAIGMPKLEQQNPFNDPKRLPGGAVSPAVNNTASHQTSNAWQPSTNKEQHLGLMSSVSYVKKEPGDLSSEQQNRHNLSKLHGYSSVNSAQLEQGGASQGTLKDEFSRGLPASTSMPPATSTGLLPHGSVSPSVMTQLDPSVSLSSQIPSNAPGIVARTPLKKPAVTQKKPLEALGSSPPPPSKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAAQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLCVEERMRDLISNLIRISKQRVDFEKTKHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKIRKLNDVDGNSGVDGDKEKDDGRGKSTKVNKEEDDKMRANAANVAARAAYGGDDMLSKWQLMVEQARQKRDGGVDVSSGSQLAKDVNRKSSSTSGRSTKDNQEGEKKGSATFIASSVARKLGKSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSDAPIEQG 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0372 965 MobiDBLite consensus disorder prediction 861 902 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 328 351 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 636 650 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 871 889 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 568 608 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 483 501 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 287 313 - -
Aed6g0372 965 Gene3D Histone, subunit A 700 745 IPR009072 GO:0046982
Aed6g0372 965 MobiDBLite consensus disorder prediction 669 690 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 437 501 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 547 650 - -
Aed6g0372 965 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 65 387 IPR045144 GO:0005669|GO:0006352
Aed6g0372 965 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 355 957 IPR045144 GO:0005669|GO:0006352
Aed6g0372 965 MobiDBLite consensus disorder prediction 63 117 - -
Aed6g0372 965 ProSiteProfiles RST domain profile. 209 290 IPR022003 -
Aed6g0372 965 Pfam RCD1-SRO-TAF4 (RST) plant domain 212 285 IPR022003 -
Aed6g0372 965 Pfam Transcription initiation factor TFIID component TAF4 family 655 951 IPR007900 GO:0005669|GO:0006352
Aed6g0372 965 MobiDBLite consensus disorder prediction 793 829 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 437 453 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 325 355 - -
Aed6g0372 965 PANTHER IP01149P-RELATED 65 387 - -
Aed6g0372 965 PANTHER IP01149P-RELATED 355 957 - -
Aed6g0372 965 Coils Coil 683 703 - -
Aed6g0372 965 CDD TAF4 650 951 IPR007900 GO:0005669|GO:0006352
Aed6g0372 965 MobiDBLite consensus disorder prediction 193 212 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 164 187 - -
Aed6g0372 965 MobiDBLite consensus disorder prediction 66 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0372 Aed-Chr6 3191975 3206353 Wgd