Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0364 ATGGCAACTTCAGAGAATCCCAACGCGCGTCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCAATATGCGAACTTCACGCTAACCCCGCGAAGAAGAAACGCGTCGTTTTGGGCGACCTCACTAACGTTTCCTCAAACGACGTCGCCGTTTCGGAAAAACCTGTTTCACAGATTCAGAAACAGAAGAAAATTAAACTCGAGAAACCGGCCGCGCCGGTTGCCACACCGGAGAAGGTAGAGGAAAGACACGACCCCCAACTTTGTGGGCCCTACGTTTCGGATATTTACGAATACCTTCGCGGAATTGAGGTGGATCCTAGTAAGAGGCCATTGGTGGATTATGTTCATAAAGTTCAGAGGGATGTTAATGCTAACATGCGCGGTGTTCTGGTGGATTGGTTAGTGGAAGTTTCTGAAGAATACAAGCTTGTTTCGGACACGCTTTATTTTTGTGTTGCGTACATTGATAGGTTTTTGTCGTTGAATGTTTTGTCGAGGCAGAAGTTGCAATTGCTTGGTGTTGGTACAATGCTCATTGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAACACATACTCTAAGGAAGAGGTTGTGAACATGGAAGCTGATATATTGAAGGCTTTGAAGTTTGAATTGGGTGGTCCTACAGTGAAGACATTCTTAAGGAGATTCTCCAGAGTTGGTCAAGAGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTGTTGGATTACAATTGCATTAAGTTTTTGCCATCTATGGTGGCTGCATCAGTTGTATTCCTAGCGAGATTTATGTTTAGCACAAAGACACATCCTTGGAATTTGGCGCTCCATCAACTCACAAGATATAAACCTGCTGACTTGAAGGAATGTGTTCTAAACTTGCATGACTTGTACCTCAGTAGGAGAGGGTCCTCTTTGCATGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCTCTTTCTTATTTTGAATTTGAGGGGCAGATTCTTGGACAATTAAAAATGTTTCCTAACACTAGAGATGAGATTTTCAGACTTTCTGTTGCACTTGTTGATGCTGATAGGGAGAGAGAGTTCCTTGAAGGATTTACAATTTCTATGTATAGGGAAGTGCTATACGTTCCATTCTTTGATGTCCAGACTCTGATGTTTAGAAATCAATTTTTCAGCCGTAATCAAGTGTTTGATTGGTGTTGGATTGGTTACTTGAAACACAGCTATTTGCTGAGTTTGTCTGTGTGGTCTGAACAAATGATAGTTAAGTGTGGGCAGTATGATAGGCTAGATCTAGATCTGGTTGTGGTAAAAGGGAAGTTAAAAAAGAAAAACTTACTAGGATTAAGTGCATGTTTAAGAGAATTGTTTCTTAATAGAATTAATTTTTAA 1488 0.4194 MATSENPNARPQREAKKRAAAAICELHANPAKKKRVVLGDLTNVSSNDVAVSEKPVSQIQKQKKIKLEKPAAPVATPEKVEERHDPQLCGPYVSDIYEYLRGIEVDPSKRPLVDYVHKVQRDVNANMRGVLVDWLVEVSEEYKLVSDTLYFCVAYIDRFLSLNVLSRQKLQLLGVGTMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFSRVGQEGVDTSDLQFEFLSCYLAELSLLDYNCIKFLPSMVAASVVFLARFMFSTKTHPWNLALHQLTRYKPADLKECVLNLHDLYLSRRGSSLHAVREKYKQHKFKCVATTPSPPEIPLSYFEFEGQILGQLKMFPNTRDEIFRLSVALVDADREREFLEGFTISMYREVLYVPFFDVQTLMFRNQFFSRNQVFDWCWIGYLKHSYLLSLSVWSEQMIVKCGQYDRLDLDLVVVKGKLKKKNLLGLSACLRELFLNRINF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0364 495 CDD CYCLIN 127 216 IPR013763 -
Aed6g0364 495 ProSitePatterns Cyclins signature. 128 159 IPR006671 -
Aed6g0364 495 Gene3D - 95 345 - -
Aed6g0364 495 SMART cyclin_7 230 318 IPR013763 -
Aed6g0364 495 SMART cyclin_7 133 217 IPR013763 -
Aed6g0364 495 SUPERFAMILY Cyclin-like 84 223 IPR036915 -
Aed6g0364 495 CDD CYCLIN 226 317 IPR013763 -
Aed6g0364 495 PANTHER CYCLINS 22 364 IPR039361 -
Aed6g0364 495 SMART Cyclin_C_2 226 349 IPR004367 -
Aed6g0364 495 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 364 - -
Aed6g0364 495 Gene3D - 109 224 - -
Aed6g0364 495 SUPERFAMILY Cyclin-like 226 351 IPR036915 -
Aed6g0364 495 Pfam Cyclin, N-terminal domain 95 223 IPR006671 -
Aed6g0364 495 Pfam Cyclin, C-terminal domain 226 348 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0364 Aed-Chr6 3133043 3137309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0364 1 358 Core Cell Cycle Gene Families AT5G43080 59.218 1.05e-147 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0364 6 3133043 3137309 Aed4g1559 4 20478501 20480216 PCT