Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0363 ATGGCTGTAGCCGCAGAGAACGATACGCGCCCCACGCGCGTTGCGAAGAAGAGAGCCGCTGCTGCAATAAGCAAACTACTTCGCCCCGCCGCAAGGAAGAAGCGCGTGGTGTTGGGAGACCTCACCAACACTGTTGCCACGTCGGAAAAAAAACACTCTCCGCAGAAAAAGAAAATACCCAAAGAGCCCCTAGCCGCGCCGGAGAACCCAAACGACCCGCAACTGTGTGGGCCCTACGATTCCGACATTTACGAATACCTACGTGGAATGGAGGTAGTGGATCCTCGTAAGCGAGCGTCGGCGGATTATATCGAGAATGTTCAGACGGAAATTGATGCTAAAATGCGCGGTATTCTGGTGGATTGGATGGTGGAAGTTGCGGAGATCTACTCGCTTGTTTCGGACACTCTTTACCTTTGTGTCGCTTATTTTAATGATCATGTGTGGTCGGTAAAATACGAAGACAAGGCACCCGAGATTGAGAAATTTTGTTACATTACGGATTACACATACTCCAAAGAGGAGGTTGTGAACATGGAAGTCGATATATTGAAGTCATTGAAGTATGAATTGGGCGGTCCTACAGTGAATACATTCTTAAGGTATACATCTGATCTCCAATTTGAGTATCTTAGCTGCTACCTTGCTGAGCTCACTTTGTTGGATTATTATTGTGTGAAGTTCTTGCCATCTATGGTGGCAGCATCTGGTGTATTCCTAGCAAGATTTTTGTTCAACACAAAGACACATCCTTGGAATTTGGCGCTACATATACTCACCGGATATAAGCCCGCTGACTTGAAGGAATGTGTTCTAAACATACATTCCTTGTACCTCAGTAAGAGAGGAGGCGATTTGCAAGCTGTGAGAGAGAAGTACAAACACCATAAGTTCAAATGCGTGGCAACAACACCATCTCCTCTAGCGATACCTTCTTCTTTTTTATAA 948 0.4589 MAVAAENDTRPTRVAKKRAAAAISKLLRPAARKKRVVLGDLTNTVATSEKKHSPQKKKIPKEPLAAPENPNDPQLCGPYDSDIYEYLRGMEVVDPRKRASADYIENVQTEIDAKMRGILVDWMVEVAEIYSLVSDTLYLCVAYFNDHVWSVKYEDKAPEIEKFCYITDYTYSKEEVVNMEVDILKSLKYELGGPTVNTFLRYTSDLQFEYLSCYLAELTLLDYYCVKFLPSMVAASGVFLARFLFNTKTHPWNLALHILTGYKPADLKECVLNIHSLYLSKRGGDLQAVREKYKHHKFKCVATTPSPLAIPSSFL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0363 315 PANTHER CYCLINS 22 314 IPR039361 -
Aed6g0363 315 SUPERFAMILY Cyclin-like 194 307 IPR036915 -
Aed6g0363 315 CDD CYCLIN 115 184 IPR013763 -
Aed6g0363 315 CDD CYCLIN 194 275 IPR013763 -
Aed6g0363 315 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 314 - -
Aed6g0363 315 Pfam Cyclin, N-terminal domain 152 191 IPR006671 -
Aed6g0363 315 Pfam Cyclin, N-terminal domain 82 145 IPR006671 -
Aed6g0363 315 SMART cyclin_7 197 276 IPR013763 -
Aed6g0363 315 SMART cyclin_7 121 185 IPR013763 -
Aed6g0363 315 SMART Cyclin_C_2 194 307 IPR004367 -
Aed6g0363 315 Pfam Cyclin, C-terminal domain 194 306 IPR004367 -
Aed6g0363 315 Gene3D - 100 145 - -
Aed6g0363 315 Gene3D - 152 186 - -
Aed6g0363 315 MobiDBLite consensus disorder prediction 42 73 - -
Aed6g0363 315 PIRSF Cyclin_A_B_D_E 2 147 IPR039361 -
Aed6g0363 315 PIRSF Cyclin_A_B_D_E 148 313 IPR039361 -
Aed6g0363 315 Gene3D - 187 310 - -
Aed6g0363 315 SUPERFAMILY Cyclin-like 71 191 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0363 Aed-Chr6 3128633 3130926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0363 1 311 Core Cell Cycle Gene Families AT5G43080 48.256 2.56e-103 305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0363 6 3128633 3130926 Aed6g0363 6 3128633 3130926 ECH
Aed6g0363 6 3128633 3130926 Aed4g1553 4 20459973 20461808 PCT