Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0354 ATGGGAGGTTGGGCTATCGCTGTGCATGGTGGTGCTGGTGTCGACCCCAATCTTCCACTCGAGCGCCAAGAAGAAGCCAAACAACTTCTCACACGCTGTCTCAATCTTGGAATCTCTGCTCTAAACTCCAATCTTTCCGCCATAGATGTCGTCGAACTTGTGGTGAGGGAATTGGAAACGGATCCGCTGTTCAATTCGGGCCGTGGATCTGCCCTGACGGAAAAAGGAACGGTGGAGATGGAGGCTAGCATCATGGATGGTCCTAAACGACGATGCGGCGCCGTTTCGGGTCTTACCACCGTTAAGAACCCCATCTCGCTCGCTCGTTTGGTTATGGACAAATCCCCACATTCCTACCTCGCCTTCTCCGGCGCCGAAGATTTTGCAAGGAAACAGGGTGTGGAGGTTGTGGACAACGAGTACTTTATCACACCTGACAATGTTGGCATGCTCAAGCTGGCAAAGGAAGCAAACACAATCCTGTTTGATTACCGAATCCCAACATCGGGGTGCGGATCCGGTGTGGAGAGTCCACTGCAAATGAATGGACTCCCGATAAGCGTGTACGCGCCGGAGACAGTCGGGTGCGTGGTGGTGGACCGGGAAGGCCGGTGCGCGGCAGCCACATCCACAGGCGGGCTAATGAACAAAATGACCGGTCGCATCGGTGACTCGCCGCTGATAGGCGCTGGGACCTACGCGTGCGACGTGTGTGGGGTATCGTGCACGGGTGAGGGCGAGGCCATCATACGTGGCACCCTGGCGCGTGAGGTGGCAGCGGTGATGGAATACAAAGGCTTGAAGCTCCAACAAGCAGTGGATTTTGTCATCAAGCACCGTCTCGATGAAGGGCTGGCTGGTCTCATTGCAGTGTCCAACGCTGGCGAAGTGGCTTATGGGTTCAATTGCAATGGCATGTTTAGGGGCTGCGCCACTGAAAATGGCTTCATGGAGGTTGGAATCTGGGAATAA 972 0.5514 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALNSNLSAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARKQGVEVVDNEYFITPDNVGMLKLAKEANTILFDYRIPTSGCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACDVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQQAVDFVIKHRLDEGLAGLIAVSNAGEVAYGFNCNGMFRGCATENGFMEVGIWE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0354 323 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 323 - -
Aed6g0354 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 320 IPR029055 -
Aed6g0354 323 PANTHER L-ASPARAGINASE 1 323 IPR000246 GO:0016787
Aed6g0354 323 Gene3D (Glycosyl)asparaginase 193 323 - -
Aed6g0354 323 Pfam Asparaginase 4 322 IPR000246 GO:0016787
Aed6g0354 323 CDD Asparaginase_2 5 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0354 Aed-Chr6 3074927 3077604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0354 6 257 Miscellaneous Gene Families AT4G00590 28.058 2.12e-15 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0354 6 3074927 3077604 Aed6g0354 6 3074927 3077604 ECH
Aed6g0354 6 3074927 3077604 Aed4g1544 4 20401253 20403603 PCT