Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0349 ATGGGACAATCTGTTTCCTCCGCCGCTGTCGCTAGCCGTCGCGAGAGGGACCAAAGCCACCGCTCCGTCAACGCCTCCAAGACCAGATCCATCTCCTCGGTTTCGCCGATGGCCGGTTATTCCTCCGGAGCCGGCGAAGAAGAAAGCGATAACCGTCGCATCGAGGCGGTTACCGATGGAAACACGGACTACATCTCCGATCTCCCGAACGAGTGCTTGGCTTCGGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAACAGCTGCTCGCTTGTTTGCCGGCGGTGGCTGCAGATCGAAGGACAGAGCCGTCACCGCCTCTCTCTCAAAGCTGAATTCAACCTGTTTCCGGCGATTCAGTCGCTCTTCTCTCGGTTCGATTCGGTGACCAAGCTCGCGTTGAAGTGCGACCGCAGATCCGAGAGCATAAAAGACGACGCGCTCGTGCTTATCTCGCAGCGGTGCCCTAACCTCACGCGCCTGAAACTCCGCGCGTGCCGCGAGCTCACCGACGCAGGAATGGAAGCGTTCGCGAAGAACTGCAAGGGATTGAAGAAGCTCTCGTGCGGATCCTGCACGTTCGGATCCAAAGGCATGAACGCGGTGCTCGACAACTGCTCCGCGCTGGAAGAGCTCTCCGTGAAGCGCCTCCGAGGACTCGCCGACGCGACAATGGCGGATCCGATCGGTCCCGGCGTGGCTGCGGCGTCGCTCAAAACCGTTTGCCTGAAAGAGCTCTATAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCGAAGAATCTGAAAACCTTGAAGCTTTTCCGGTGCTCCGGTGACTGGGACCGGTTGTTTCAGCTCATGGCAGATCGTGTGACGAATATGGTTGAGGTTCACGTCGAGAGGCTTCAGATTAGCGACGTTGGATTGCAAGCAATCGCGAATTATTCGAGCTTGGAGATTTTGCATCTCGTCAAGACTCCTGAATGTTCTGATATTGGACTTGCTGCTGTTGCAGATAGGTGCAAGCTTCTGCGGAAGCTTCACATTGATGGATGGAAGGCGAATCGAATTGGCGACGAGGGGTTGATAGCTGTTGCAAAAGGTTGCCCTAATTTGCTTGAATTAGTGCTAATTGGGGTAAACCCCACTAAGTTGAGTTTGGAAATGTTGGCATCTAATTGCCAGAATCTTGAGCGGTTGGCTTTGTGTGGAAGTGATTCGGTTGGTGATCCTGAGATATCTTGTATTGCTGCAAAGTGTGTGGCTTTGAAGAAATTGTGTATTAAGAGTTGTCCTGTTTCGGATCAAGGGATGGAGGCATTGGCGAATGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGGGTTACCCCTGAGGGTGGTGATTGGTTGAGGAGGACAAGAGGGTCAATTGCTGTTAATTTAGATACTGGTGAGGCAGAGCTTCAGGAAGCGAGTGCTAGTGATGGAGGGGCACAGGAAAATGGTATAGAGTTCCCTCAAATGCCTGCCCAAATCGCAGCGGCGGCAGCAGCATCAGCGTCTGCATCGAGCAGCACGGCTCGGTCTGGTTTGTTCAAGTCGAGGTTAGGGCTTTTGTCTGGGAGGAGTTTAGTGGCTAGCACTTTCAGGAGATGGTCGGGTGGTAGCACTAGTGCACGCCATGGTTAG 1659 0.5377 MGQSVSSAAVASRRERDQSHRSVNASKTRSISSVSPMAGYSSGAGEEESDNRRIEAVTDGNTDYISDLPNECLASVFQFLSSADRNSCSLVCRRWLQIEGQSRHRLSLKAEFNLFPAIQSLFSRFDSVTKLALKCDRRSESIKDDALVLISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCSALEELSVKRLRGLADATMADPIGPGVAAASLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNMVEVHVERLQISDVGLQAIANYSSLEILHLVKTPECSDIGLAAVADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKLSLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSIAVNLDTGEAELQEASASDGGAQENGIEFPQMPAQIAAAAAASASASSSTARSGLFKSRLGLLSGRSLVASTFRRWSGGSTSARHG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0349 552 MobiDBLite consensus disorder prediction 1 52 - -
Aed6g0349 552 Pfam F-box 68 104 IPR041567 -
Aed6g0349 552 PANTHER UNCHARACTERIZED 46 485 - -
Aed6g0349 552 SMART fbox_2 68 108 IPR001810 GO:0005515
Aed6g0349 552 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Aed6g0349 552 Pfam Leucine Rich repeat 416 435 IPR001611 GO:0005515
Aed6g0349 552 SMART LRR_CC_2 154 179 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 180 204 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 284 308 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 309 333 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 205 231 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 413 437 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 387 412 IPR006553 -
Aed6g0349 552 SMART LRR_CC_2 334 361 IPR006553 -
Aed6g0349 552 Gene3D Ribonuclease Inhibitor 106 469 IPR032675 -
Aed6g0349 552 MobiDBLite consensus disorder prediction 24 39 - -
Aed6g0349 552 ProSiteProfiles F-box domain profile. 62 98 IPR001810 GO:0005515
Aed6g0349 552 SUPERFAMILY RNI-like 111 472 - -
Aed6g0349 552 Gene3D - 64 103 - -
Aed6g0349 552 SUPERFAMILY F-box domain 60 98 IPR036047 GO:0005515
Aed6g0349 552 PANTHER F-BOX PROTEIN SKIP2 46 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0349 Aed-Chr6 3030066 3031724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0349 6 3030066 3031724 Aed6g0349 6 3030066 3031724 ECH