Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0346 CCAACCCTTCCTCACCTATCGGTCTTTATAAGGTCCACGTTCACTGCACCTTTTTCCCCACTCTCACTTTTCTCCTCTCTCTTCTCCAAAAACATCTCAATGGGTTCTATTACATCGTCCGCGACCATGAAAATGGCGATCGCGCTTCTGTTCACGGTCTTGGCGGTTTCATCGGCCTTGGACATGTCCATAATTTCCTACGACAACGCCCACTCGGACAAGGCCGCGTGGCGCACAGACGAGGAGGTTATGTCGCTGTACGAGCAGTGGCTGGTGAAGCACGGCAAGGTTTACAACGCGCTCGGTGAGAAGGAGAAGCGCTTCCAGATCTTCAAGGACAACCTGCGATTCATCGACGAACACAACAACTCCGAGGAACGAACCTACAAGGTGGGACTTAACCGGTTCGCGGATCTGACCAACGAGGAGTACAGGGCCAAGTACTTGGGAACTAAGATCAACCCGAACCGGAGGCTCGGCAAGACCCCAAGCAACCGCTACGCGCCACGTGTCGGTGACAAACTACCCGACTCCGTTGATTGGAGGAAGGAAGGTGCTGTTCCTCCAGTCAAAGATCAAGGAGGCTGTGGATTACAAAAAAAAAATGCTAGAGTTGTTTCTATTGATGGCTATGAAGATGTTCCTGCCTATGATGAGATATCATTGAAAAAGGCCGTTGCAGGTCAGCCAGTGAGTGTGGCTATTGAAGGAGGAGGCAGGGAATTTCAATTATATGTTTCTCCATCTTATCCCATTAAGAATGGTCCAAACCCCCCCAACCCTGGACCATCACCCCCTTCACCCGTGAGGCCACCGAATGTCTGTGACAATTACTACAGCTGTTCCGATGCTGCTACTTGTTGCTGCATTTTTGAGTTCGGGAACGCTTGCTTCGAGTGGGGCTGCTGTCCTCTTGAAGGCGCTACCTGCTGTGATGACCACTACAGTTGTTGCCCTCATGACTATCCCATCTGCAACACTTATGCTGGAACTTGTCTCAGGAGCAAGAACAACCCATTTGGAGTGAAGGCTTTGAGGCGTACTCCAGCTAAACCCCATTGGACCTTTGGACGTAAGAACAAGGTCAACAGTGCTTAA 1098 0.5073 PTLPHLSVFIRSTFTAPFSPLSLFSSLFSKNISMGSITSSATMKMAIALLFTVLAVSSALDMSIISYDNAHSDKAAWRTDEEVMSLYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDEHNNSEERTYKVGLNRFADLTNEEYRAKYLGTKINPNRRLGKTPSNRYAPRVGDKLPDSVDWRKEGAVPPVKDQGGCGLQKKNARVVSIDGYEDVPAYDEISLKKAVAGQPVSVAIEGGGREFQLYVSPSYPIKNGPNPPNPGPSPPSPVRPPNVCDNYYSCSDAATCCCIFEFGNACFEWGCCPLEGATCCDDHYSCCPHDYPICNTYAGTCLRSKNNPFGVKALRRTPAKPHWTFGRKNKVNSA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0346 365 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 68 197 - -
Aed6g0346 365 Pfam Granulin 286 333 IPR000118 -
Aed6g0346 365 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 194 247 - -
Aed6g0346 365 SMART Inhibitor_I29_2 87 144 IPR013201 -
Aed6g0346 365 SUPERFAMILY Cysteine proteinases 78 255 IPR038765 -
Aed6g0346 365 Pfam Cathepsin propeptide inhibitor domain (I29) 87 144 IPR013201 -
Aed6g0346 365 SMART GRAN_2 275 332 IPR000118 -
Aed6g0346 365 PANTHER CYSTEINE PROTEASE 68 197 - -
Aed6g0346 365 Gene3D - 65 153 - -
Aed6g0346 365 Gene3D Granulin 274 341 IPR037277 -
Aed6g0346 365 PANTHER CYSTEINE PROTEASE 194 247 - -
Aed6g0346 365 SUPERFAMILY Granulin repeat 272 306 - -
Aed6g0346 365 Gene3D Cysteine proteinases 199 262 - -
Aed6g0346 365 Gene3D Cysteine proteinases 168 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0346 Aed-Chr6 3012400 3016337 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0346 6 3012400 3016337 Aed7g2479 7 26506456 26509695 PCT