Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0331 ATGGAAGACCACGCGCACGCTGCACTTCCTCCCGGTTACCGGTTCTACCCCTCCGAAGAGGTTCTCGTCGGTTACTACTTAACAAAGAAGAACGAGAACCGGGAGGAGGGGGGTTTCTCCGGTTCTGATTTGATCAGAGAACTGAACCACTACGATCACGACCCCTTCGAATTACCGGACGCTGCGTGCTTTTCGTACGGTTACCGAGGGAGGAAGAAGCATTGGTTCTGTTACGCTCTTACTAAAGAGGCGAAACGCAGAATCAGAAAGGTGAGAAGCGGGTTCTGGCTCCCTAAGGGAAGGGTTCGGGATATTTGCGACAACGCCGACGTCGTTTTGGGCACGAGGACGCGTTTCGTTTTCTACGTCGGCAGTTCCCTGAAAAACGCCGCCAGAACGGATTGGAATTTGTACGAATACGCATTGGTTGACCGCGTTCTGCCTCCTCATAAGAATAGTCCGTCGGAGATTGGTCTCAGTTGCTGCGCTGAAGAGAGCGCTGTGGTGGCGGTACGTCACGTTGGTGTACAGTGTGATGGATGTGTCGGGAGTGACGTTGTTGAGATTGCTGAGAATCCAATTAGGTGTGGTGGTGAACATGATGATCCAGCTGCACCTGTTTCGGTTGCTCAGGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTGGACTTCCCAGTGGCAGTACATTGTTCATTGAATCAATGACATCTCAGCAACAGATGCTTTGCATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGCATGA 768 0.5091 MEDHAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGGFSGSDLIRELNHYDHDPFELPDAACFSYGYRGRKKHWFCYALTKEAKRRIRKVRSGFWLPKGRVRDICDNADVVLGTRTRFVFYVGSSLKNAARTDWNLYEYALVDRVLPPHKNSPSEIGLSCCAEESAVVAVRHVGVQCDGCVGSDVVEIAENPIRCGGEHDDPAAPVSVAQGSQPVQERLSGLPSGSTLFIESMTSQQQMLCILEEDFIELNDIA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0331 255 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 254 - -
Aed6g0331 255 ProSiteProfiles NAC domain profile. 9 166 IPR003441 GO:0003677|GO:0006355
Aed6g0331 255 Gene3D NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
Aed6g0331 255 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 6 254 - -
Aed6g0331 255 Pfam No apical meristem (NAM) protein 10 142 IPR003441 GO:0003677|GO:0006355
Aed6g0331 255 SUPERFAMILY NAC domain 6 146 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0331 Aed-Chr6 2884250 2890318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0331 9 173 NAC Transcription Factor Family AT5G64060 32.934 7.46e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed6g0331 NAM 1.1e-19 No_clan