Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0328 ATGAATAAAAAAAAAACATCAGGGGCAGGTGTGGAAATTAAAAGAAACTTCTGCATCGACCACCTCGTCATTTCTTCCTCTTCTTCCTTTTCAATTTTCATTTCCATTTCCAATTCTCGGTGGTGTTGTTCTTCATCCATGGCTTTCCCTCAGCACCACTTCCAACGGCACTACCAAACCCAACAACAACAACAACAACAACAACAGCAGCAGCCACAAACCAAACCCTTCAGAAATCTGCAAACAATCGATGGTCAGATGTCACAGCAGGTGGCGTTTTACAACCCTACTGATTTGCAAGATCAGTCTCAGCATCCACCCTATATTCCTCCATTTCACGTTGTTGGGTTTGCTCCGGGTCCTGTTCCTCCTGCTGATGGCAGTGATGGTGGAGTTGATTTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGGAAGAGACTAAAAGAACAGGATTTTTTGGAGAACAATTCTCAGATATCTTCTGTTGATTTCCTTCAACCACGATCAGTGTCAACTGGGTTGGGCTTGTCACTAGACAATACTCGCCTTACATCCACTGGAGACTCAGCTTTGTTGTCGCTCATTGGTGATGACATTGAGCGTGAGTTGCAGCAGCAGGATGTAGAGATAGATAGATTTCTCAAAGTGCAGGGGGAACGATTGCGGCAAGCAGTCTTAGAGAAGGTTCAGGCAACTCAGCTTCAGAGTGTCTCACTCATCGAAGACAAAGTCCTTCAGAAACTCCGTGAGAAAGAAGCTGAGGTAGAAAGCATCAACAAGAGGAACATGGAACTTGAAGATCGAATGGAGCAGTTGACTGTGGAAGCTGGTACATGGCAACAGAGAGCAAGATATAATGAAAATATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCATATGTCCAAAGCAGAGATAGTAAGGAAGGATGTGGTGACAGTGAGGTTGACGATACAGCTTCTTGCTGCAATGGCCGTTCCCTTGATTTTCATCTGCTTTCAAGGGAGAATACCGACATGAAGGAGATGATGACATGCAAGGCTTGCAGAGTCAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTCTGTAAAGACTGTGAAAGTAAGCTTAGTTTCTGTCCTCTATGTCAATCCTCCAAATTTATCGGCATGGAGGTTTACATGTAA 1185 0.4405 MNKKKTSGAGVEIKRNFCIDHLVISSSSSFSIFISISNSRWCCSSSMAFPQHHFQRHYQTQQQQQQQQQQQPQTKPFRNLQTIDGQMSQQVAFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDVEIDRFLKVQGERLRQAVLEKVQATQLQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGTWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSLDFHLLSRENTDMKEMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0328 394 PIRSF SBP1_RNase_bind 46 394 IPR017066 -
Aed6g0328 394 Pfam Zinc finger, C3HC4 type (RING finger) 346 384 - -
Aed6g0328 394 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 47 394 IPR017066 -
Aed6g0328 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 394 IPR013083 -
Aed6g0328 394 PANTHER F2G19.2 47 394 - -
Aed6g0328 394 MobiDBLite consensus disorder prediction 54 76 - -
Aed6g0328 394 ProSiteProfiles Zinc finger RING-type profile. 348 383 IPR001841 -
Aed6g0328 394 Coils Coil 243 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0328 Aed-Chr6 2862935 2867558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0328 348 384 Miscellaneous Gene Families AT4G39050 45.946 8.43e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0328 6 2862935 2867558 Aed6g0328 6 2862935 2867558 ECH