Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0221 ATGTCACCCGATGACACACCACCTTCAAAGCCCGCAGCCACATCAAAAGACCAAGAGACTCAAAGTTCCGGTGGTGGCAGCAGAAAAAGCTCCTCCACAAGGCCCCAAGAGCAATGTCTAAAGTGCCCCCGTTGTGACTCACCCAACACCAAATTCTGCTACTACAACAACTACAGCCTCACGCAGCCAAGGCATTTCTGCAAAACATGTAGAAGATACTGGACAAAAGGTGGAGCTTTGCGCAACGTCCCTATTGGAGGTGGATGCAGGAAGAACAAGAAGGTGAAGTCATCATCAAGGCTCTCATGTGACTCCAAAGACTCTGGCTCCTCCTCTTCAGAATTTGGTGGCCTCAAGTTCCTTCATGCTCTTTCTCCTTCTTCCATGGACTTTCACCTTGGAGGGTTACCCTTCCCTAGGCTGCACCATCACCCAGTTCCAACCACCTTCAACCACTTTTCCTCTTTTGGAGACACTTCTAGTGCTTCTTCATGTTTCAACAACCTTGACCCTTCTCCTGCTGCCGGCACTGCTCTCAATTACCCCTTCTCTTACAATGGTGCGATCCAAGGTATGAGCTCTTTGAACGTTCATACTGGTCTTGCCTCTTCCATAGAGTCTTTGAGTTCTATAAACCAGGACTTGCACTGGAAGCTGCAGCAGCAGCGGTTGGCAATGCTGTTTGGTGGAGACAACAACAACAACACCACCCAGAAAGATCATAGTGGCAGTGGAGTCTCATCAACGGTTAACCTTAACCACCACCTTGATGAGAACCAGACACAGAAACCACAACCCATTTTGTTTCAGAACCTTGAGATTTCAAAGCCAGGGACTTTCCCTGTTGGGAACTCAAGAAAAGAACAAGGTCCAAGTGGGGACACGCACACGCCTTCTACAGAGTGGTTCTTTGGGAACTCTTATGCCTCGGTTACTCCTACACCTACTACTACAAGTAGTGGTGGCCCGGGGAATAATGATAATAATGCAAGCAATTGGAGTAACGGTGTCCATGCTTGGGGTGATGTGCCGCAGCAATATAGTGCTTTGCCCTAG 1056 0.4867 MSPDDTPPSKPAATSKDQETQSSGGGSRKSSSTRPQEQCLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSSRLSCDSKDSGSSSSEFGGLKFLHALSPSSMDFHLGGLPFPRLHHHPVPTTFNHFSSFGDTSSASSCFNNLDPSPAAGTALNYPFSYNGAIQGMSSLNVHTGLASSIESLSSINQDLHWKLQQQRLAMLFGGDNNNNTTQKDHSGSGVSSTVNLNHHLDENQTQKPQPILFQNLEISKPGTFPVGNSRKEQGPSGDTHTPSTEWFFGNSYASVTPTPTTTSSGGPGNNDNNASNWSNGVHAWGDVPQQYSALP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0221 351 MobiDBLite consensus disorder prediction 275 351 - -
Aed6g0221 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 351 IPR045174 GO:0003700|GO:0006355
Aed6g0221 351 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Aed6g0221 351 MobiDBLite consensus disorder prediction 7 38 - -
Aed6g0221 351 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Aed6g0221 351 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 16 351 - -
Aed6g0221 351 MobiDBLite consensus disorder prediction 1 39 - -
Aed6g0221 351 MobiDBLite consensus disorder prediction 231 251 - -
Aed6g0221 351 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Aed6g0221 351 MobiDBLite consensus disorder prediction 285 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0221 Aed-Chr6 1944087 1945142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0221 30 351 C2C2-Dof Transcription Factor Family AT5G65590 40.303 6.35e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed6g0221 zf-Dof 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0221 - - gmx:100780729 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0221 6 1944087 1945142 Aed7g1535 7 17837274 17839360 PCT