Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2624 ATGGATAGAGAAGATCAAAAGGCATCTCTACTGTCTGAATTGATACATATCACAGTGGAAGATAGACTCAAAGTTGATAATATACAGCCAAACAAGAATAAGGCAATAGAGAGAGCTGAACTGTATGAAGAAGTGAGGAAGCAGTTATGGCTAGCAGGGCCTTTAATATCTGTTTCTTTCTTAAATTATTCCCTACAAATTATATCTGTAATGTTTGTGGGGCATCTCGGCCAATTGCCTCTCTCTGCTGCTTCAATGGCTACTTCTTTTGCCTCTGTCACTGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCTTTGGATACTTTTTCTGGGCAATCATATGGAGCAAAGCAGCACCATATGTTAGGGATACACATGCAAAGGGCTATGGTTGTTCTTATGATTGTTAGCATACACCTTGCATTTATTTGGGCAAATACAGGATCCATTCTAGTTGCCCTAGGCCAAGACCCTGAAATATCTGCAGAAGCTGGACAATATGCTCAGCTAATGATTCCAAGCCTTTTTGCCTATGGCATTCTTCAGTGCCTCAACAGATTTTTGCAAACCCAAAATATTGTGTTTCCTATGGTGTTCAGCTCTGGACTCACTACTTTACTGCATATTCTTATATGTTGGACTTTGGTATTCAAATCTGGACTTGGGAACAGAGGAGCTGCTATAGCAAATGCTATATCTTACTGGATAAATGTCTTCATCCTGATACTCTATGTCAAGTTTTCTCCCTCGTGCTCAAAAACTTGGACTGGATTTTCCAAAGAAGCATTGCGTGGCATCCCTTCTTTTCTTAAACTTGCAGTTCCTTCTGCTGTTATGGTTTGCTTGGAAATGTGGTCGTTTGAAATGATGGTACTCCTCTCTGGCCTTCTTCCAAATCCAAAATTAGAAACATCAGTGCTTTCTATCTGTCTGAATACTTCGACAACCGTTTGGATGATCCCCTTTGGACTCAGTGGAGCAGTAAGTAATGAAGCAGAAGTGGTCCAATATGTAGCTATCATGTTGCCAATTCTTGCGACATCCATTTTCCTTGATGCACTCCAGTGTGTTCTTTCAGGCACGGCTAGAGGATGTGGTTGGCAAAAGAAAGGTGCTTTAATTAATCTCGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTTATTTGCTTTTGTCGCACACATGGGTGGGAAGGGGCTTTGGCTGGGGATCATATGTGCACTAGTTGTTCAAGTGTCATGTCTTCTGATCATTACAATACGTACTGATTGGGAGCAAGAGGTTGCAAAGAAGACTAAAGACAGAGTCTACGAATCAATGAGAGCTGAGGTCATAGTCTCATGA 1347 0.412 MDREDQKASLLSELIHITVEDRLKVDNIQPNKNKAIERAELYEEVRKQLWLAGPLISVSFLNYSLQIISVMFVGHLGQLPLSAASMATSFASVTGFSLLVGMASALDTFSGQSYGAKQHHMLGIHMQRAMVVLMIVSIHLAFIWANTGSILVALGQDPEISAEAGQYAQLMIPSLFAYGILQCLNRFLQTQNIVFPMVFSSGLTTLLHILICWTLVFKSGLGNRGAAIANAISYWINVFILILYVKFSPSCSKTWTGFSKEALRGIPSFLKLAVPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTSTTVWMIPFGLSGAVSNEAEVVQYVAIMLPILATSIFLDALQCVLSGTARGCGWQKKGALINLGSYYLVGIPSAILFAFVAHMGGKGLWLGIICALVVQVSCLLIITIRTDWEQEVAKKTKDRVYESMRAEVIVS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2624 448 CDD MATE_eukaryotic 44 431 IPR045069 GO:0042910|GO:1990961
Aed5g2624 448 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 329 - -
Aed5g2624 448 PANTHER MULTIDRUG RESISTANCE PROTEIN 329 435 - -
Aed5g2624 448 TIGRFAM matE: MATE efflux family protein 54 329 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed5g2624 448 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed5g2624 448 Pfam MatE 329 388 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed5g2624 448 PANTHER PROTEIN DETOXIFICATION 28 329 - -
Aed5g2624 448 PANTHER PROTEIN DETOXIFICATION 329 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2624 Aed-Chr5 26927103 26929590 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0260 7 1829685 1832149 Aed5g2624 5 26927103 26929590 ECH
Aed1g1915 1 16415634 16419547 Aed5g2624 5 26927103 26929590 ECH
Aed5g2624 5 26927103 26929590 Aed5g2624 5 26927103 26929590 ECH
Aed5g2624 5 26927103 26929590 Aed7g0260 7 1829685 1832149 PCT
Aed7g0262 7 1847376 1851202 Aed5g2624 5 26927103 26929590 PCT