Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1884 ATGGGGTTGAGAATATCAAGTTCCAACATAGTTTCAGCTTTCACAGTCTTGACGTTACCCCCAAAAACTCTCTGCGTGCTTCCTCTGTTGTGGTTGTGTTCTGTTCTGTTCTTCTGTTGTCTCCGTTTCTCTTCTTCTCTCATCACCGCCATGTTCTTCAAATCCCGATCCCTCTTCTTCCCGCTCCTTTTATCTCTCTTCCTTTCTTCCACCTTCGCTTCAGAGTCAGATCACAAGTTTCGACTTGATGAACCAGTTAACCTTTGGGTGAACAAAGTTGGTCCTTATAACAATCCTCAAGAAACATACAACTATTACAGCCTTCCATTTTGTCATCCATCGAGTAGTGCTAGTGCTGCACACAAATGGGGTGGTCTTGGTGAGGTCCTGGGTGGCAATGAACTCATTGATAGCCAAATTGACATAAAGTTCCGAAAAAATGTGGATAAGACTGTCTTTTGCCAGATAGATCTTGATGAAGCAAAGGTGAAACAGTTCAAGGATGCAATAGAGAATAATTACTGGTTTGAATTCTTCATGGGATATGTTGGTGAGCTACATTCTGATAAGAACAGTGACAATAGCAAGCATGTCCTTTACACACACAAAAACATTATTGTTAAATACAACAATGATCAGATTATTTATGTCAATCTCACTCAGGATATCCCAAAGCCTTTGGAAGCAGGAAAACATTTGGACATGACATATTCTGTCAAATGGGATTCTACCAATGTCACTTTTGGGCGCCGCTTTGATGTCTACCTGGACCATCCTTTCTTTGAGCATCAGATTCATTGGTTCTCCATTTTTAACTCTTTCATGATGGTCATCTTCCTCACTGGATTGGTGTCAATGATATTGATGCGAACTCTTAGAAATGACTATGCAAAGTATGCTCGGGAAGATGATGATTTGGAAAGTCTGGAGAGAGATGTTAGTGAAGAATCTGGTTGGAAACTTGTGCATGGTGATGTTTTTCGGCCTCCTCGCAACTTAGTTATTCTTTCAGCTGTTGTTGGCACTGGTGCTCAGCTAGCGTTGCTGATTCTTCTTGTCGTCTTGTTAGCTATTGTTGGAATGTTGTATGTTGGGCGAGGAGCAATTGTCACTACCTTCATTGTGTGTTATGCTCTCACATCTTTTATTTCTGGTTATGTGAGTGGGGGAATGTACTCACGAAATGGGGGTAAACACTGGATTAAATCCATGATCCTCACAGCTTCTCTGTTCCCATTCATGTGCTTTGGAATTGGATTTGTCTTAAACACTATTGCTATAGGTTATGGGTCTCTAGCAGCAATTCCATTTGGCACAATGGTGGTTGTGTTTGTCATTTGGGCTTTCATCTCTTTCCCTCTAGCACTGCTTGGCACAGTTGTTGGCAGAAACTGGAGTGGTGCTCTGAATAATCCCTGTCGTGTAAAGACTATTCCTCGTCCCATTCCTGAAAAGAAGTGGTACCTCACACCCTCTGTGATATCTCTGATGGGAGGATTGCTACCCTTTGGCAGTATATTCATTGAAATGTATTTTGTATTCACTTCCTTCTGGAATTACAAGGTGTACTATGTGTATGGGTTTATGCTGCTAGTCTTTCTGATTCTTATCATCGTTACTGTTTGTGTGACAATTGTGGGGACATACTTTTTGTTAAACGCTGAGAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCCTCAACAGCTGTTTATGTGTATTTGTACTCAATATACTACTACTATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACCAGCTTTTATTTTGGATACACTTTGATGTTTTCTCTTGGACTAGGAATTCTATGTGGAGCTGTGGGTTTTCTTGGTTCAAATTTGTTTGTGAGGAGGATCTACAGAAATATCAAGTGCGATTAA 1905 0.4094 MGLRISSSNIVSAFTVLTLPPKTLCVLPLLWLCSVLFFCCLRFSSSLITAMFFKSRSLFFPLLLSLFLSSTFASESDHKFRLDEPVNLWVNKVGPYNNPQETYNYYSLPFCHPSSSASAAHKWGGLGEVLGGNELIDSQIDIKFRKNVDKTVFCQIDLDEAKVKQFKDAIENNYWFEFFMGYVGELHSDKNSDNSKHVLYTHKNIIVKYNNDQIIYVNLTQDIPKPLEAGKHLDMTYSVKWDSTNVTFGRRFDVYLDHPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPPRNLVILSAVVGTGAQLALLILLVVLLAIVGMLYVGRGAIVTTFIVCYALTSFISGYVSGGMYSRNGGKHWIKSMILTASLFPFMCFGIGFVLNTIAIGYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGALNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRRIYRNIKCD 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1884 634 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 53 634 IPR004240 GO:0016021
Aed5g1884 634 Pfam Endomembrane protein 70 102 591 IPR004240 GO:0016021
Aed5g1884 634 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 53 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1884 Aed-Chr5 22069853 22076221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1884 69 634 Miscellaneous Gene Families AT1G10950 86.888 0.0 963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1884 5 22069853 22076221 Aed5g1884 5 22069853 22076221 ECH
Aed7g2310 7 25302660 25309690 Aed5g1884 5 22069853 22076221 PCT