Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1769 ATGGCTCGAGTAGAAAGTGGCCAAGCTAGTGAAGGGATTAAGCTGTTTGGGAAAACGATTACGTTGTATGATAGAGAAAGAAAAGAAGATAAAAACGTGAGTGATGAAGATGCGACAGAGGAGATGAAGAGACCTGATAAGATCATACCATGTCCAAGATGCAAGAGCATAGAAACCAAATTCTGCTACTTCAATAACTACAACGTTAATCAGCCCAGGCATTTCTGCAAGGGCTGCCAGAGATACTGGACTGCCGGTGGAGCCCTTCGCAACGTGCCAATAGGAGCTGGCCGACGAAAGGCCAAACCACCTGGCCTTGACCCTACTGGATTTATGGACGGTGGATTTGTATCCACCGTCCAACCACAACAGTTTGGTTTGGAAGAGAGATTGGCTTTGGATGAATGGCATGCTGCCACCGTGGCTCACGGTGGTTTCCGGCAGCTTTTTCCATCTAAAAGGCGGAGGATGAGCTCAGCTCAGCATGAAAGTCAAAAGAAGTTTGTTACAATCCACGAAATCACAGAACATCCGAATCAGATAGAAACAAAGGAGGCTTGA 561 0.467 MARVESGQASEGIKLFGKTITLYDRERKEDKNVSDEDATEEMKRPDKIIPCPRCKSIETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPGLDPTGFMDGGFVSTVQPQQFGLEERLALDEWHAATVAHGGFRQLFPSKRRRMSSAQHESQKKFVTIHEITEHPNQIETKEA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1769 186 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Aed5g1769 186 MobiDBLite consensus disorder prediction 154 186 - -
Aed5g1769 186 Pfam Dof domain, zinc finger 47 102 IPR003851 GO:0003677|GO:0006355
Aed5g1769 186 MobiDBLite consensus disorder prediction 156 186 - -
Aed5g1769 186 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 6 162 - -
Aed5g1769 186 PANTHER CYCLIC DOF FACTOR 2 6 162 IPR045174 GO:0003700|GO:0006355
Aed5g1769 186 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1769 Aed-Chr5 21312048 21314198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1769 8 159 C2C2-Dof Transcription Factor Family AT2G34140 58.333 4.98e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed5g1769 zf-Dof 8.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1769 - - gmx:100527802 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1769 5 21312048 21314198 Aed5g1769 5 21312048 21314198 ECH