Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1515 ATGACCCTTGCCATGCCCTTGGAGACCTTGTTGGGATCAAGAAACACTTCAGAAGGAAGCACAGCAATCACAAGCAGTGGGTCTGTGACAAGTGCTCCAAAGGCTATGCGGTTCAATCTGATTACAAGGCTCACATCAAAACCTGTGGCACCCGGGGCCATTCCTGTGACTGTGGCCGTGTCTTTTCCAGATTCAGTCCCTGCTCAGCAATTGTTTTTGCTCTCAATAACAGAAACCAAGTACAAGGATGGTGCAGAGAAACAAAAATTCTGCATCTCAGATACCCTTCATGTGAAAGATTTTCCATCTTCTAGAGCATTATGCTATGAATATGAATATTACACACTGCATAGTGCATACACGTCCAATCCATCTCCTTCTGGCTTTGCACTAGGAGTTCTCATGACAGCTTTTGAGGTGGAGAGTTTCATAGAACACCAAGATGCATGCACTGTCCGGCAGCACCGGCCAGAGTTACAAGCACTTCAAGCTGCATGCTCTTCTAGAACAGCTTCAAGCGCAAGTCCCTCTAGTGAGGCAAATTTTAGCATAGCCCCACCATTGCAAGGACTTCCAGTACTGCCAAAACCAGCTGAACAACAACAACAACAACCAGCTGCAACAGTCTTATTAACTTCAGAGATACACAACAACAATTCGCATAACTTAGAACTTCAGCTCTTACCCTCCTCAATAAATTCTCAAGAGAAACGAAATCCAAAGGAAAACTATGGTTTGAAACTTTCAATAGGCTCATCTAGTAATGACAAAGGGAATGAACCAGCTGAGAGAACATGTTCAGAAGCACAAAGGAGCCCACCTGAGAGGAATAATAATAATAGTAATAATAATGTGAGTGACTATTCCACATTGGAAGTGGCAAAGTTGAAGGAGTTTGCAGGTGAGGAACTCAAGTTGGCCATGGCAGAAAAGGCTTATGCTGAAGAGGCTAGAAGAGAGGCCAAACATCAAATTGGGATAGCTGAACTTGAGTTTGAGAATGCCAAAAGGATAAGGAAACAAGCACAAGCTGAACTTGCAAATGCTGAAGAGCTGAGAAGGCAAGCCACCAAGAAGATAAGTTCCACTGTTATGGAAATAACATGCCAAACTTGCAAGCATCAGTTTCATCAGTCTTCAACTGTTAATGGGGTTCCATCAGAAGAAACCTCCATTGTGATGAGTTACATGTCCTCAGCCACCACAGAAGGAGAACCAGAATGA 1224 0.4363 MTLAMPLETLLGSRNTSEGSTAITSSGSVTSAPKAMRFNLITRLTSKPVAPGAIPVTVAVSFPDSVPAQQLFLLSITETKYKDGAEKQKFCISDTLHVKDFPSSRALCYEYEYYTLHSAYTSNPSPSGFALGVLMTAFEVESFIEHQDACTVRQHRPELQALQAACSSRTASSASPSSEANFSIAPPLQGLPVLPKPAEQQQQQPAATVLLTSEIHNNNSHNLELQLLPSSINSQEKRNPKENYGLKLSIGSSSNDKGNEPAERTCSEAQRSPPERNNNNSNNNVSDYSTLEVAKLKEFAGEELKLAMAEKAYAEEARREAKHQIGIAELEFENAKRIRKQAQAELANAEELRRQATKKISSTVMEITCQTCKHQFHQSSTVNGVPSEETSIVMSYMSSATTEGEPE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1515 407 Coils Coil 325 359 - -
Aed5g1515 407 PANTHER OS03G0310200 PROTEIN 139 406 IPR039288 GO:0009630
Aed5g1515 407 MobiDBLite consensus disorder prediction 271 286 - -
Aed5g1515 407 PANTHER ZINC FINGER PROTEIN SHOOT GRAVITROPISM 5 139 406 - -
Aed5g1515 407 MobiDBLite consensus disorder prediction 246 260 - -
Aed5g1515 407 MobiDBLite consensus disorder prediction 170 184 - -
Aed5g1515 407 MobiDBLite consensus disorder prediction 170 205 - -
Aed5g1515 407 MobiDBLite consensus disorder prediction 235 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1515 Aed-Chr5 19509692 19513263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1515 140 405 C2H2 Transcription Factor Family AT1G68130 37.184 1.47e-36 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1515 5 19509692 19513263 Aed5g1515 5 19509692 19513263 ECH