Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1294 ATGGTGGTGCGGTTAGTCTATGCTCTTATGTTGGGGTTTTTGGCTTTGAATTGCGTGCAAGTGTTTCATGAATCCAATGCTCAACTCATACCACAAGATGAAGTGAAAGTATTACAAACAATATCGGATAAACTAGAGAACGTGAATTGGAATGTCACAGAACGTTCCTGCACAGAGGATGGAGGCTTCGGTGAGAAGATTAATATAGACAATGACACCGTCAGGAATGTCACATGCAATTGCGAATTCCAAAATGGCTCAGTTTGCCACGTTGATAGGATTTTACTCAAGATTCAAAATATATCTGGAGTTTTCCCCAGTGAATTTGGAAATCTCACACACCTGAAAGAACTTGATCTCACTCGCAACTATATCAATGGTTCACTTCCAACAAATTTTCCTCCCAACTCACTGGCCATTTTGTCCCTTCTTGGAAACCGACTTAGTGGTCCAATTCCCACACAAATTGGTGATATTGCTAGTCTGGAGGCACTGCTTCTTTCTGCAAATAATTTTACAGGGACCATACCAGAAACATATAGCCAACTAAAGAATCTCACTGACTTTAGGATAGATGGAAGCAGTTTATCTGGACCAATACCCAGTTTCATTGGAAACTGGACCAATCTTGGTAGATTGAGAATAACTGATTTGAATGGTGGACCAACTATGACATTTCCTGATCTGAAGAATTTGACAATACTGAAACGATTGGAATTGAGAAATTGCTTAATCACGGGTGATATTCCAGATTACATTGGTGACATGCCAGAAATGACTACTTTAGACCTAAGCTTCAACATGTTGACTGGAACTTGGCTTCTAGCCATTCTTCTTCAGCGGCAACTACGGCTTCATAAGTCATTGTTCATAAACTGTGGAGGAGAACTGGGGGAGTTTGAAGGCAATGACTATAAAGGTGACCTCAAGCAAGATGGCATTTCAAACTTTGATCTTAAAAATGAAGGAGAATGGGCTTATAGCAGCACAGGAGTATATTTGGGAAACGATGGTTCGCAATATATAGCACAAAATCCATATTCTTTGAATATCAGTGGTCCAGAATACTATCAAAATGCTCGCCTTTCACCTCTATCACTCAACTACTATGGCCTTTGTATGCTAAATGGAAATTATAAAGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGATGAGACTTACAAAAGCCTAGGAAGGCGCATATTTGATGTTTCGGTTCAAGGTATTAGATATTGGAAAGATTTTAATATTATGGAAGCGGCTGGTGGAGTTGGAAAGGGCATCACTAAGGAACTTGATGTTGATGTTGATGATGGTACCTTGGAAATCCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTGAGATGATACCAAACTTTGAGAATCCTTCATCAAAAGGGCTGTCTGCTGGAGTTATTGTTGGAATTGTTGCTGCATCTTGTGGGCTTGTCATATTGATACTGGCATATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAAGTTCTCCCCAGAGGAGGCCATGAGAATGCTGAGCTTGGCACTCTTATGCACCAATCCATCTCCCACTCTTAGACCAGCCATGTCATCTGTAGTGAGCATGCTCGAAGGAAAAATTCCAATCCAAGCACCGATAGTCAAGCGCAGTGAGAGCAGCCAAGATGCAAGATTTAGAGCCTTTGAGTTGCTATCACATGACAGCCAAACCTTTGTGTCTTCTGCATACTCACAAGCAAGTGTGAAGCAAAGACAGAAATCAGAAGAGGGACCATGGGTTAACTCCTCCATATCTCTGCCTAGTGGAGATGATTATTCTTCAACCAGTAAACTTGTTTAA 1908 0.4099 MVVRLVYALMLGFLALNCVQVFHESNAQLIPQDEVKVLQTISDKLENVNWNVTERSCTEDGGFGEKINIDNDTVRNVTCNCEFQNGSVCHVDRILLKIQNISGVFPSEFGNLTHLKELDLTRNYINGSLPTNFPPNSLAILSLLGNRLSGPIPTQIGDIASLEALLLSANNFTGTIPETYSQLKNLTDFRIDGSSLSGPIPSFIGNWTNLGRLRITDLNGGPTMTFPDLKNLTILKRLELRNCLITGDIPDYIGDMPEMTTLDLSFNMLTGTWLLAILLQRQLRLHKSLFINCGGELGEFEGNDYKGDLKQDGISNFDLKNEGEWAYSSTGVYLGNDGSQYIAQNPYSLNISGPEYYQNARLSPLSLNYYGLCMLNGNYKVKLHFAEIMFSDDETYKSLGRRIFDVSVQGIRYWKDFNIMEAAGGVGKGITKELDVDVDDGTLEIHLYWAGKGTTAIPDRGVYGPLISAIEMIPNFENPSSKGLSAGVIVGIVAASCGLVILILAYVLQEQGNLLELVDPSLGSKFSPEEAMRMLSLALLCTNPSPTLRPAMSSVVSMLEGKIPIQAPIVKRSESSQDARFRAFELLSHDSQTFVSSAYSQASVKQRQKSEEGPWVNSSISLPSGDDYSSTSKLV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1294 635 Gene3D Transferase(Phosphotransferase) domain 1 495 578 - -
Aed5g1294 635 Pfam Malectin domain 288 470 IPR021720 -
Aed5g1294 635 PANTHER - 165 213 - -
Aed5g1294 635 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
Aed5g1294 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 287 435 - -
Aed5g1294 635 Gene3D Ribonuclease Inhibitor 199 288 IPR032675 -
Aed5g1294 635 SUPERFAMILY L domain-like 88 275 - -
Aed5g1294 635 PANTHER - 208 259 - -
Aed5g1294 635 PANTHER - 69 167 - -
Aed5g1294 635 PANTHER - 510 620 - -
Aed5g1294 635 PANTHER - 287 435 - -
Aed5g1294 635 MobiDBLite consensus disorder prediction 605 635 - -
Aed5g1294 635 Gene3D - 289 475 - -
Aed5g1294 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 208 259 - -
Aed5g1294 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 167 - -
Aed5g1294 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 510 620 - -
Aed5g1294 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 165 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1294 Aed-Chr5 12397363 12411762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1294 499 626 Receptor kinase-like Gene Family AT1G53440 59.542 1.25e-37 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1294 5 12397363 12411762 Aed5g1294 5 12397363 12411762 ECH