Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1277 ATGTTTCTGCAGATGGAATCTGTTAAGCCATCAGCAGTGACACCAACAAGCAAGAGCAAATTGGCTCGAACTTTCGCCAAAGTTCTTCACGTTAGAGCAGTGACTGGAATTGCAGCAGTTGATGGACTGAAGAATGTTGTTAAAGTTGATGCAGCAGATCTCAGCAATGAAGCAAACATGTGTAAGAATGCTGCAATTAACATAGAAGAAGATGAAGAGCTTCGCAAAAGAAAGGCCACAGAAGCTTTGCTTGCAAAAACTTTTGCTAGCATTTCAACTGTTAAGGCTTCATATGCTCAGCTTCAGAATTCTCAGTCTCCTTATGACCCTGATGGAGTTCAAGCGGCTGATCAATTGGTAGTGTCAGAGTTCAAGACATTGTCGAAGCTAAAGCAATGTTACTTCAGAAAGCAATTTGATCCTTCACCAGACAGAGCAATCCTTGCAGCTAAGTTAAAAGAGCTTCAAAGTGTCAACAAGACCTTTGAGATCACGGGGAAGAAGCTAGAATCGCAGGTGCGGCTCAAGGAATCCGAGGTTATATTTCTCTGCGAAAAGCTCGAGGAAGCTTGTGTGAACAACAGGTCAATTGAGAAGAGGCTAAACCAAAGTGGCTCATTATCAGTCCTTGATAATCTCAACATGTCAGGACTAAGTCCTAGCCATTTCATCACTGTTCTTCGCCACACAGTGAGGTCCATTCGGAACTTTGTGAAGCTGTTAGTGAATGAGATGAGATGTGCTGGTTGGGATATTGATGCTTCAGTGAATGCTATCATTGGAGAGAATGTGGCTTACTTGAAAGAGGATCACAAGGGGATGTTTGATTCATTCAATTTCCCTAACTTCTCTATACCAAATGAGTCTCTACCAGATAGGAACAAGAGGCAAGTTTTCTTTGGGAGGTTCAATGAGCTGAAGCCTGTGAAAGCAAAGGAGTTTCTTGCCGGGAAACCAAGATCACCCTTTGCGAAATTCTGCAGGGTCAAGTACTTGAAACTTGTTCATCCGAAGATGGAGGCGTCATTCTTCGGGGATGTGAATCAGAGGAACATGCTGAGTGGTGGAGAGTTTCCTGACACTAGTTTCTTCACCTCATTTGCTGAGATGGCTAAGAGGGTGTGGCTCCTGCATTGCTTGGCTTTTTCCTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGGGAAAGGGTGCAGATTCTCTGATGTGTACATGGAGAGTGTGAATGAAAACGATGAAGAAATTGCAGCAGTGGAGTCTGAGTCACAAGCTGCTGCGGTTTTCACTGTGGTTCCAGGGTTTAGGATTGGTAAAACTGTGATACAGTGCCAAGTTTATCTCTCACAGCACCAAGGAGGAGGCAAATTTAATTTATCAAATACTTGCCTCCAAATTTTGTTGATATTAGGCCGGTGGGAGGGATGGTCTAGCTAG 1431 0.4368 MFLQMESVKPSAVTPTSKSKLARTFAKVLHVRAVTGIAAVDGLKNVVKVDAADLSNEANMCKNAAINIEEDEELRKRKATEALLAKTFASISTVKASYAQLQNSQSPYDPDGVQAADQLVVSEFKTLSKLKQCYFRKQFDPSPDRAILAAKLKELQSVNKTFEITGKKLESQVRLKESEVIFLCEKLEEACVNNRSIEKRLNQSGSLSVLDNLNMSGLSPSHFITVLRHTVRSIRNFVKLLVNEMRCAGWDIDASVNAIIGENVAYLKEDHKGMFDSFNFPNFSIPNESLPDRNKRQVFFGRFNELKPVKAKEFLAGKPRSPFAKFCRVKYLKLVHPKMEASFFGDVNQRNMLSGGEFPDTSFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVGKGCRFSDVYMESVNENDEEIAAVESESQAAAVFTVVPGFRIGKTVIQCQVYLSQHQGGGKFNLSNTCLQILLILGRWEGWSS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1277 476 Pfam Plant protein of unknown function (DUF641) 76 200 IPR006943 -
Aed5g1277 476 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 5 446 IPR040225 GO:0009639|GO:0009959
Aed5g1277 476 PANTHER OS01G0203800 PROTEIN 5 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1277 Aed-Chr5 11946189 11948249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0517 1 6808567 6813761 Aed5g1277 5 11946189 11948249 ECH
Aed5g1277 5 11946189 11948249 Aed5g1277 5 11946189 11948249 ECH