Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1261 ATGCCTTCTTCACCGAAGTCCTACGCGCGGCAACAGCCCACGCTCCTCGCCACGCGCAGATCCCAACTCCTCATCTCCCTCCTCTTCCTCCTCGGATTCCTCGCCTTCCTCGCCGTCCAGATTCGCGGCACCAACCGATGCCTCACCGCACACCCTCGATCGGTGCGCGTCACCTGGGAACACTCCTCCGCCAACGCCGCCAACGCCGATGGGGACAGGCATAAGGTCATGGGCTTCGTCGGCATTCAGACCGGCTTCGGATCCGTCGGGAGGAGAGACTCCTTGAGGAAAACGTGGTTCCCCTCTGATCGCCAAGGACTTCAAAGCTTGGAAGAAGCTACTGGGTTGGCTTTTAGGTTTATCATTGGTAGAACAGGTGATAGAGCAAAGATGACTGCGCTACAGAAGGAAGTAGCAGAATATGACGATTTCATTTTGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTACGCTCTTTTTGACGCTGAATTTTATGTCAAAGCAGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTACTGGCTAAAGAGCGATCTCATCCTCAGACATACATAGGATGTATGAAAAAGGGACCTGTTTTCACTGATCCAAAACTTAAATGGTATGAACCATTGTCGCATTTGCTTGGAAAGGATTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCAATGAATGTCAAACATGAGAATAATCATGAGCTTTGTGCTACAGATTGTACAGCCACATCCATTGCTGTGTGGGATATTCCTAAGTGTTCAGGCCTATGTAATCCAGAAAAGAAAATGTTGGAGCTACATCAAAAGGAAACATGCTCTAAGAGCCCAACTCTGGAATCAGAAGATGAATAG 927 0.4779 MPSSPKSYARQQPTLLATRRSQLLISLLFLLGFLAFLAVQIRGTNRCLTAHPRSVRVTWEHSSANAANADGDRHKVMGFVGIQTGFGSVGRRDSLRKTWFPSDRQGLQSLEEATGLAFRFIIGRTGDRAKMTALQKEVAEYDDFILLDIQEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSHLLGKDFRMFSNEDVTIGAWMLAMNVKHENNHELCATDCTATSIAVWDIPKCSGLCNPEKKMLELHQKETCSKSPTLESEDE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1261 308 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 233 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed5g1261 308 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 232 299 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed5g1261 308 Pfam Galactosyltransferase 91 234 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed5g1261 308 PANTHER HEXOSYLTRANSFERASE 3 233 - -
Aed5g1261 308 PANTHER HEXOSYLTRANSFERASE 232 299 - -
Aed5g1261 308 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 251 IPR029044 -
Aed5g1261 308 Gene3D - 79 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1261 Aed-Chr5 11630020 11636667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1261 16 308 Glycosyltransferase AT1G53290 64.458 5.54e-153 430
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1261 5 11630020 11636667 Aed5g1261 5 11630020 11636667 ECH
Aed1g0542 1 6982031 6986179 Aed5g1261 5 11630020 11636667 PCT