Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1236 ATGAGTCCAAAGAAATGGTTTAAGAAAATTATTGGGTTGAAGAAACAGAAGGAAGATAAATCAATACTTGCAAAGGTGCAATCTACCCCTGAAAAATCAAATGAGTCCTCAGAAGAGAAACAAGAAGAAAACACTCTTGAAGAGACAGTTAGTAGCATTCCCAATGAAGAAGCTTTGGTAATAGAAAGGAAAGTTCTTCCCACAAGGTTGATAGAAGATATTGCTGCTACTCGGATTCAAAATGCATTTCGTGCATTTCTGGTGGAATGGTGTGGAGGCTCTGATACACTGGAAGAGATACTCTCCAGGTTACACCAGCGAGAAGAAGCAGCAGTGAAACGAGAGCGAGCTATGGCATATGCCTACTCTCATCAGGGCCCCATTATGACACAGAAACCCAATAAAAACCACAGTGATAGCAACATTCAGAAAGGGAAAGAAAACCAACAACAACGTTCTCTAGCCAAATAA 471 0.4055 MSPKKWFKKIIGLKKQKEDKSILAKVQSTPEKSNESSEEKQEENTLEETVSSIPNEEALVIERKVLPTRLIEDIAATRIQNAFRAFLVEWCGGSDTLEEILSRLHQREEAAVKRERAMAYAYSHQGPIMTQKPNKNHSDSNIQKGKENQQQRSLAK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1236 156 MobiDBLite consensus disorder prediction 22 53 - -
Aed5g1236 156 PANTHER IQ-DOMAIN 5-RELATED 1 87 - -
Aed5g1236 156 PANTHER IQ-DOMAIN 5-RELATED 88 129 - -
Aed5g1236 156 PANTHER IQ-DOMAIN 10 1 87 - -
Aed5g1236 156 PANTHER IQ-DOMAIN 10 88 129 - -
Aed5g1236 156 MobiDBLite consensus disorder prediction 32 46 - -
Aed5g1236 156 MobiDBLite consensus disorder prediction 125 156 - -
Aed5g1236 156 MobiDBLite consensus disorder prediction 127 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1236 Aed-Chr5 11231582 11234836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1236 88 125 IQD Protein Family AT3G15050 76.316 7.10e-16 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0550 1 7035925 7038943 Aed5g1236 5 11231582 11234836 ECH
Aed5g1236 5 11231582 11234836 Aed5g1236 5 11231582 11234836 ECH